Neobacillus niacini: ACN6MT_25685
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Entry
ACN6MT_25685 CDS
T11354
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nna Neobacillus niacini
Pathway
nna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6MT_25685 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nna03019
]
ACN6MT_25685 (rnjA)
Messenger RNA biogenesis [BR:
nna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACN6MT_25685 (rnjA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
XQA32360
LinkDB
All DBs
Position
5248899..5250566
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AA seq
555 aa
AA seq
DB search
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLREVNIPIYGGKLALGLIKNKLEEHGLLRTAKLN
VIQEDDVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGQVVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPEFTMSERLVGESIDDIFRKVSGRIIFATFASNIYRLQQ
VVEAAVANGRKVAVFGRSMESAITIGQELGYINAPKETFIEANQINRLPADKVTILCTGS
QGEAMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVNRTINQLFRAGAEVVHGKL
SNIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQRMHAKLAVDCGVEEENCFIMDNGE
VLALSENSAQVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMKDFKI
ASGPDLISRGFVYMRESGDLINDAQNLITKHLNKVMERKTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatgaccaaactgctgtttttgctttaggtggtttgggcgaaatc
ggaaaaaacacatatgcagtacaatttcaggatgaaataatcctgattgacgcggggatt
aagtttccagaggatgagctattaggaattgattatgttattcctgattatacctattta
gtaaagaacgaagataaaataaaaggattgtttattacccatggacacgaggaccatatc
ggcggtattccttatttgttacgtgaagtaaatattccgatttatggcggtaagcttgcc
ctaggacttattaaaaataaactcgaagaacatgggctcttaagaacggcgaagttaaat
gtaattcaagaggatgatgtgatcaagttccgaaagacatctgtttctttcttccgaacg
acacatagtatcccagattcatacggtatcgttgtaaaaactccgccaggacaagtcgtg
catactggcgactttaaatttgattttacaccagtgggtgaaccggctaatttaactaaa
atggctgaaatcggaaaagaaggagtactatgtttattgtcagatagtactaatagtgaa
attccggaattcaccatgtctgaacgtcttgttggcgaaagcattgatgacattttccga
aaggtctcaggccgcattatattcgctacctttgcttctaatatttacagactacagcaa
gtagtggaagcagcagttgctaacggaagaaaagtcgctgtttttggccgcagtatggag
tcggctattacgatcggtcaagaacttggctatattaatgcaccaaaagaaacgtttatc
gaagcaaatcaaattaaccgacttcctgcagacaaggtaacaattctatgtactggcagc
caaggtgaagctatggccgcattatctagaatcgcaaatgggacgcatagacagattcaa
attattccaggcgataccgttgttttctcatcttcacctatcccagggaacacaattagt
gtaaatcggacgattaaccagttgtttagagcaggtgctgaagttgttcacggtaaactc
agtaacatccatacttctggacatggcggtcaagaggaacaaaagttaatgcttcgctta
atcaaaccaaaattctttatgccaattcacggcgaatatagaatgcaaagaatgcatgct
aaattagcagtagactgtggcgttgaagaagagaattgttttattatggacaatggtgaa
gtattagctctttctgaaaacagcgcgcaagtagcagggaaaatcccttcaggctctgtt
tatattgatggcagcggtattggtgacattgggaatattgttctacgtgatagaaggatt
ctttctgaagaaggattagtagttgtagtggttagcattaacatgaaagacttcaagatt
gcttcaggtccggaccttatctctagaggtttcgtctacatgagagaatctggcgactta
attaacgacgctcaaaacctaattactaagcatttaaataaggtaatggaacgaaaaaca
agtcaatggtccgaaattaaaaatgaaatcacagatacattagcaccattcctttacgaa
aaaacgaaacgcagaccaatgattttaccaatcattatggaagtataa
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