KEGG   Neobacillus niacini: ACN6MT_25685
Entry
ACN6MT_25685      CDS       T11354                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nna  Neobacillus niacini
Pathway
nna03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACN6MT_25685 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nna03019]
    ACN6MT_25685 (rnjA)
Messenger RNA biogenesis [BR:nna03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACN6MT_25685 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_2 DUF4453
Other DBs
NCBI-ProteinID: XQA32360
LinkDB
Position
5248899..5250566
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLREVNIPIYGGKLALGLIKNKLEEHGLLRTAKLN
VIQEDDVIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGQVVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPEFTMSERLVGESIDDIFRKVSGRIIFATFASNIYRLQQ
VVEAAVANGRKVAVFGRSMESAITIGQELGYINAPKETFIEANQINRLPADKVTILCTGS
QGEAMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTISVNRTINQLFRAGAEVVHGKL
SNIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQRMHAKLAVDCGVEEENCFIMDNGE
VLALSENSAQVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMKDFKI
ASGPDLISRGFVYMRESGDLINDAQNLITKHLNKVMERKTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgaccaaactgctgtttttgctttaggtggtttgggcgaaatc
ggaaaaaacacatatgcagtacaatttcaggatgaaataatcctgattgacgcggggatt
aagtttccagaggatgagctattaggaattgattatgttattcctgattatacctattta
gtaaagaacgaagataaaataaaaggattgtttattacccatggacacgaggaccatatc
ggcggtattccttatttgttacgtgaagtaaatattccgatttatggcggtaagcttgcc
ctaggacttattaaaaataaactcgaagaacatgggctcttaagaacggcgaagttaaat
gtaattcaagaggatgatgtgatcaagttccgaaagacatctgtttctttcttccgaacg
acacatagtatcccagattcatacggtatcgttgtaaaaactccgccaggacaagtcgtg
catactggcgactttaaatttgattttacaccagtgggtgaaccggctaatttaactaaa
atggctgaaatcggaaaagaaggagtactatgtttattgtcagatagtactaatagtgaa
attccggaattcaccatgtctgaacgtcttgttggcgaaagcattgatgacattttccga
aaggtctcaggccgcattatattcgctacctttgcttctaatatttacagactacagcaa
gtagtggaagcagcagttgctaacggaagaaaagtcgctgtttttggccgcagtatggag
tcggctattacgatcggtcaagaacttggctatattaatgcaccaaaagaaacgtttatc
gaagcaaatcaaattaaccgacttcctgcagacaaggtaacaattctatgtactggcagc
caaggtgaagctatggccgcattatctagaatcgcaaatgggacgcatagacagattcaa
attattccaggcgataccgttgttttctcatcttcacctatcccagggaacacaattagt
gtaaatcggacgattaaccagttgtttagagcaggtgctgaagttgttcacggtaaactc
agtaacatccatacttctggacatggcggtcaagaggaacaaaagttaatgcttcgctta
atcaaaccaaaattctttatgccaattcacggcgaatatagaatgcaaagaatgcatgct
aaattagcagtagactgtggcgttgaagaagagaattgttttattatggacaatggtgaa
gtattagctctttctgaaaacagcgcgcaagtagcagggaaaatcccttcaggctctgtt
tatattgatggcagcggtattggtgacattgggaatattgttctacgtgatagaaggatt
ctttctgaagaaggattagtagttgtagtggttagcattaacatgaaagacttcaagatt
gcttcaggtccggaccttatctctagaggtttcgtctacatgagagaatctggcgactta
attaacgacgctcaaaacctaattactaagcatttaaataaggtaatggaacgaaaaaca
agtcaatggtccgaaattaaaaatgaaatcacagatacattagcaccattcctttacgaa
aaaacgaaacgcagaccaatgattttaccaatcattatggaagtataa

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