Candidatus Nitrospira neomarina: PQG83_01355
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Entry
PQG83_01355 CDS
T09428
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
nneo
Candidatus Nitrospira neomarina
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WNM62419
UniProt:
A0AA96GQS0
LinkDB
All DBs
Position
295305..298748
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AA seq
1147 aa
AA seq
DB search
MSNLERLPDADARLMAETTFDRNVVVLAGAGTGKTTLLVNRLVHALLREPHPLRVTDMLA
LTFTNKAANEMKSRLRDRLHALLAACEAEAGSEDSDGTGLEEIKQRYHVSTAHVRGKIQV
ALRDLEKSQIATLHSFAAHVLRLYPLEARVDPHFHEDEGMQFLETFQHAWDAWLEQELGR
QGSAHAQWQDLLNHMGLHEIRSFAFSLCQDQISIPELDQQVCAEGSSPAFLKWLQSKQHQ
VRSLLSKYDRAKPRKVEKLLSLAERVFDRVADGEPPMDCHLSDEEKDLVDSTIGKAPGEW
DASDFQDARRAIQAAQQLLQVNEVLLGKVLHVLGPFVERVRQDFSAKGWIRFDGLLILVR
DLLRDHPMVREQLKGTYAAIMVDEFQDTDPVQYEILLYLGECTNECGRYWRDIRLMPGKL
FIVGDPKQSIYAFRRADIEAFDQVVEKVTQDGGIVCTLLTNFRSDGTILEAVNAVFDRLF
IPQANVQPPNVPLAVGRMREPGSGSTGMEICVMANPQGEDEWDAEGATRVEAEWLAGWIE
EQLLPGSQWIMEKGGRTSLRPGHIAVLLRKFTNAQVYLEALQRHNIPCMADGERHFYRRQ
EVIDVVNVLRVLDDPTDALALVGILRSSLGGLTDREIMDVMKLGPLDIRQAQRLDTWESA
RKAVIQGLFQRLAWLHAQANRLPLPELLDHLFQQLPLVELAAASSHGEQAVVNVWKLRDL
MSEQAAIPSLSFSAWVERLADSLMTHPSEPEAPLAEETLDAVRVLTIHKAKGLEFPVVLL
PGLHQKATGLDRGAQITFDWISGLYGCTLPPVWNAGQVPLWEKQRIREAAEQRRLLYVGM
TRARERLILSGGILPKVGGESLLSLIQGIVEGEFGNPELDIVRVGGVSIPHTVVTPAVLK
SWNPPQHHSDPEGSGEVMISTPQWDTREMRWQQTNQAEAYVNPSMLHQAKSAQEPEKRGQ
GSRGTGQRLGILMHRVLQRWNFQSEPGRVQSALVDFCERQLPGRSGLDKSEVVKELETLF
DHFLGSPGYRELQRATILGREVPFTMPWPVGQHESSLPRTCVMEGVMDVVYEIDGDVWVG
DYKTDRVSSRMVEQRAETYRAQAQAYARAARQCLGPAVKGCKLFFLRLGEVVTVTVGTEE
TMFQHEQ
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctcgaacgtcttcccgatgccgatgcgcgactgatggcggaaaccacgttt
gatcgtaatgtcgttgtgctggccggggccggtacgggtaaaacaacgctgttggtgaat
cgattggttcatgcgcttctgagggaaccacacccgttacgcgtgaccgacatgttggct
ctgaccttcacgaataaagcggctaatgaaatgaaatcgcggctccgcgaccggttgcat
gcgttgctggctgcttgtgaggcggaagccggaagtgaagattccgatggcacaggcctg
gaggagatcaaacaacgctatcatgtgtccacggcgcatgtgagagggaaaattcaggtc
gccttgcgtgatctggagaaatcgcaaattgccacgctccatagttttgccgctcatgtt
cttcgtctgtatcccctagaagccagggtcgatcctcatttccatgaggatgaagggatg
caatttcttgagacatttcaacatgcgtgggatgcctggttggaacaggaattaggtagg
caaggttcggcgcatgcccagtggcaggacctgctcaatcacatgggtttgcatgaaatt
cgatcctttgccttttcgctctgccaggatcagatttctattcctgaattagatcaacaa
gtgtgtgccgaaggttcctctccggcctttctgaagtggctacagagtaaacagcatcag
gtccgatcattgctatcaaaatacgatcgcgccaaacctcgaaaagttgagaagctctta
tctcttgctgaacgcgtatttgatcgggtggccgatggggaaccaccaatggactgtcat
ttatctgacgaggagaaagacctggttgatagcaccattggcaaggccccgggagagtgg
gatgcgtcggattttcaagatgccaggcgggcgattcaagctgcgcaacagctgttgcag
gtcaatgaagtcctgttgggaaaggtccttcatgtgcttgggccatttgtcgaacgagtt
cgccaggatttttcggcgaagggatggattcgatttgatgggctcttgatcctggtcaga
gatctcttacgggatcatcccatggtcagagaacaattgaaggggacctatgcggccata
atggttgatgaatttcaggatactgatccggttcaatatgaaattttactttatctaggt
gaatgcacaaatgagtgcgggaggtattggcgggatatccggcttatgccggggaagctg
tttattgtgggtgatcccaaacaatcgatctatgccttccggcgagctgatatcgaggcg
tttgatcaggtcgtggagaaagtgacgcaggatggagggatcgtatgtactcttctgacc
aattttcgtagtgatgggaccattcttgaagccgtcaatgcggtgtttgatcggttattc
attcctcaagccaatgtccaaccccccaatgtccccctggcggttggacggatgcgagag
ccgggctccggctcgacaggaatggagatctgtgtcatggccaatcctcaaggggaggac
gaatgggatgctgagggggccacacgggtggaagccgaatggttagcggggtggattgag
gaacaattgctgccgggaagtcagtggatcatggagaagggagggagaacctccttgcgt
cccgggcatatcgcggtgttgttaagaaaatttaccaatgcgcaggtgtatctcgaagcg
ttgcagcgccacaatattccctgcatggccgatggtgagcggcatttttaccggcgtcag
gaagtgattgatgtggtgaatgtgcttcgcgtcctggatgaccccaccgatgctctggcc
cttgtgggcattctccgttcttcattaggcgggctgacggatcgggagattatggatgtg
atgaagcttggcccgttggatatccggcaggctcagagacttgatacatgggagagtgcc
cgaaaggcagtcattcaaggcctttttcagcggctggcctggcttcatgcccaggcaaat
cgactccctctcccggaattgcttgatcatttgtttcagcaacttcctctcgtggaattg
gccgccgcctcgagccatggtgagcaggcggtggtgaatgtctggaagcttcgcgacctt
atgagtgaacaggcggccatcccttctctatcgttttctgcctgggtggaacgattggcc
gattcccttatgacccatccttcagagccggaggcccctttggccgaagagacgttagac
gccgtccgtgtcctaacgattcataaggccaaggggctcgaatttcccgtggtgctgtta
cccgggttgcatcagaaggctacgggactggatcgcggggcacagattacatttgactgg
attagcggcttatacggttgtacgttgccacctgtatggaatgcaggccaggtgcctctg
tgggaaaagcaacggatccgggaagctgccgaacagcgacgtctgctctatgtgggaatg
accagggccagggagcggttaattttatcagggggcatactcccgaaagtggggggggag
agcctgttgagtcttattcaggggattgttgaaggagagttcgggaatccggaactggat
attgtgcgagtgggaggagtctccattcctcacaccgtcgtgacgcccgcggtgttaaaa
tcctggaaccccccacagcaccattctgatcctgaaggtagcggtgaggtgatgatctcc
acgccacagtgggacacacgtgaaatgagatggcaacagaccaatcaggcggaggcgtac
gtcaatccctccatgctgcatcaggcgaaatcggcccaggagccggaaaagagggggcaa
ggttcacgtgggaccgggcagcgccttgggattttgatgcatcgggtgcttcaacggtgg
aattttcagagtgaacctggaagggtacaaagtgcgcttgtcgatttttgcgaacgccag
ttaccaggccggtcagggttggacaagagtgaggtagtcaaagaacttgaaacgctcttt
gatcactttctcggttcaccgggctatcgggaattgcagagggcaactattcttggtcgg
gaggttccatttacgatgccatggcctgtcgggcaacatgagtcttccttgccacggacc
tgcgtgatggaaggggtgatggatgtggtctatgaaatcgatggcgacgtatgggttggc
gattataaaacggatcgcgtatcctctcgcatggtggagcagcgcgcggagacttaccgg
gcacaagcgcaggcctatgcgcgggccgcacgccaatgcttgggtcctgcggtcaaaggg
tgtaaactcttttttcttcgtctcggtgaagtggtcacggtgactgtaggaaccgaggaa
acgatgtttcaacacgaacaataa
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