Candidatus Nitrospira neomarina: PQG83_01835
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Entry
PQG83_01835 CDS
T09428
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PQG83_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nneo03000
]
PQG83_01835
Transcription factors [BR:
nneo03000
]
Prokaryotic type
Helix-turn-helix
Other families
PQG83_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
bpMoxR
HTH_30
AAA
HTH_23
AAA_16
AAA_3
HTH_22
HOIP-UBA
HTH_7
Preseq_ALAS
Motif
Other DBs
NCBI-ProteinID:
WNM62510
UniProt:
A0AA96GLI1
LinkDB
All DBs
Position
405835..407256
Genome browser
AA seq
473 aa
AA seq
DB search
MAGSLDSDSDVSWSARIEGLKFLAQHVDEPVVIFNPRKELVYANPSANKIAKDCPLTLSS
SISSSSDSSNSQASNQPPCDPCHAMELFRSDRQVQDTFPCPSPSAVATPGCPFPRAVPLK
SRTGMTHVAILMGARGSESIMMVPQEEDSSDPPALAGDSFPETVPPTIIGDSEPIQQLVE
MVRLIAASEATVLIQGESGTGKELVAKTIHALSRRRLRPFIVVECSAMPETLLESELFGH
VRGSFTGAVADRKGLFEEAEGGTIFLDEITDTTPAFQARLLRVLQEGEIKPVGSNGSIKV
NVRVISAGNKSLEHLVANKSFRADLYYRLAVLPLTVPPLRERKEDILLLVKYFLEQCARK
HGREPMHLSPDAQTALVHHSWPGNVRELENLIERVVVTCPHSTIEVKDFFADHSLQPDKS
DLSSIGKIARQEAERSRILQALRDAKGDKTRAARALNISRSSLYNKLRDYHIS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccggatcgttagattctgattccgatgtgtcttggagtgcgcggatcgaaggatta
aagtttctggcgcagcatgtggatgagccggttgtgattttcaatccccggaaggaattg
gtgtatgctaatccttcagccaataaaatagccaaagactgtccattaaccctttcatca
tccatttcttcttcttccgattcttccaactcacaggcttccaatcagccaccttgtgac
ccctgtcacgccatggaactgtttcggtctgacagacaagttcaggatacatttccctgt
ccttccccttcagctgtcgccacgcctggatgtccgtttccacgtgcggtgcccttgaaa
agcaggaccggtatgacccatgttgcgatattgatgggggctcggggaagtgagagcatt
atgatggttccacaggaggaggattcatctgacccgcctgcattggctggggattccttt
ccggagaccgtgcctcccaccatcatcggagatagtgagccgattcaacaactggtggaa
atggttcgattgatcgccgcgagtgaggcaacggtgctcattcaaggggaaagtggaacg
ggcaaggaattggtggcaaagaccattcatgccttgagtcggcgacgcctccggccattt
attgtggtggaatgcagtgcaatgcccgaaaccttgctggaaagcgaattatttggtcat
gtacgtgggtcctttaccggagcggtcgctgatcgcaaaggcttgtttgaagaagccgaa
ggcggcacgatttttttggatgaaataactgataccactcctgcattccaagcccgctta
cttcgtgtcctgcaggaaggcgaaatcaagcccgtggggagcaatggatccatcaaggtg
aatgtgagggtcatctctgccgggaataaatctctggaacatcttgtggcaaacaagtcg
tttcgtgcggatttatactatcggctcgccgtcctcccgctcaccgtcccgcccttgagg
gagcggaaagaagatattctattattggtgaaatattttttggagcaatgcgccagaaag
cacgggcgtgagccaatgcatctcagccccgatgcccaaacggctctcgtgcaccattcg
tggcctgggaatgtccgggaattagaaaatttgattgaacgggtggtggtcacttgcccg
cattccacaattgaagtgaaagacttttttgcggatcattcgttgcaacctgacaaaagc
gatttgagttcgatcgggaaaatcgctcgccaggaagcggaacggtcaagaatcctccaa
gccctccgggatgcgaagggagataagacccgcgcagcgcgggccttgaatatcagtcga
tccagcctttacaacaaattgcgggactatcatatttcctaa
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