Candidatus Nitrospira neomarina: PQG83_01875
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Entry
PQG83_01875 CDS
T09428
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQG83_01875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nneo02000
]
PQG83_01875
Transporters [BR:
nneo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PQG83_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WNM62518
UniProt:
A0AA96JWH1
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All DBs
Position
complement(422140..423765)
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AA seq
541 aa
AA seq
DB search
MRISFHEHRHLSHHRSPVCSPIGSAKRILHGFQVNWRLWLMVLGLISIVGCTEALPDDTL
RFGLANSPTNLDPRFATDATSARLNRLLYSRLVDFGEGTIPIPALARWRELSPIHYRFEL
QEPTPLFHNGARLSANDVKATYASILNPATASPHRGILQIITRIDTPTENTVDFFLKQPD
SLFPGYLVIGILPANLIAKGHPFHDDPIGSGPFQFLERPDDTRLVIERRADGQRVEFLRI
PDPTVRTLKLLANEIHLLQNDLAPELVTYLSAHKGITLQQREGANFAYLGFNQLDPVVGQ
ELVRKAIAHAIDREHIIQFVLRGRARVAQALFPPEHWAGHATLSGYAYDPEAAKRLLKEA
GYDHDHRPTITYKTSTDPFRLRLATIIQYQLDQVGIDVSIQSHDWGTFYGDIKSGRFQMY
SLAWVGVKSPDIFRYAFHSDAIPPVGANRGHFADVVADRLMMQAERTLNRQEQQALYRTL
QARLQDTLPYVPLWFEDHYALTSATITGYQLSADGNFDGLSQVRWMRPPSVPPKHIARFY
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttctttccatgaacatcgccatctcagccatcatcgatcccctgtgtgttcc
cctatcggttctgccaaaagaatccttcatggctttcaggtgaactggcgattatggctg
atggtgttgggcctcatttccattgttggctgcaccgaagcgcttcccgatgacacgctt
cgttttgggttagccaattcgccgacgaatttagatccgcgttttgccactgatgccact
tcggctcgactcaatcggctgctgtattcgcgcctagtggacttcggcgagggcacaatc
ccgattccagctttggccaggtggcgtgaactctctcccatccattatcgattcgagttg
caggaaccgacaccactcttccacaatggggcacgactctccgccaacgatgtcaaagcc
acctatgcctccattttgaatcctgccacggcatctcctcatcgcggtattttgcaaatt
atcacccggatcgacacgccgacggagaatacggttgatttctttctgaagcagcccgat
tcattatttcccggctatttagttatcggcattctccccgcaaaccttattgccaagggg
caccccttccatgacgatcccatagggagcgggccctttcaatttcttgaacgccccgat
gacacccggcttgtaatcgagcgacgagcagatggtcaacgtgttgaatttttaagaatt
cccgatccgaccgttcgaacccttaagcttttggcaaacgagattcatctcctacaaaat
gatctcgcccctgagcttgtcacgtatttgtccgcccacaaaggcatcaccttgcaacag
cgtgagggggcaaattttgcctacctgggattcaatcagttagatcctgtggtcggtcaa
gaactggtgcggaaggctattgcccatgccatcgatcgtgagcacattattcaattcgtg
ttgagaggacgagccagggtcgcgcaagcgctctttcctccggagcattgggctggacat
gccaccttatcagggtacgcctacgatccggaggcggccaaacgcttattgaaggaagcc
ggctatgatcatgaccatcggccgaccatcacctataaaacctcaactgacccctttcga
ttgcgcttggcgacaatcattcaataccaactcgaccaggttggaattgatgtctccatc
caaagccacgattggggcacattttacggtgacatcaaatccggtcgattccaaatgtat
agcctggcgtgggtcggtgtgaaatctccggatattttccggtatgcctttcatagtgac
gccatccctcctgtcggcgccaatcgtggtcactttgccgatgtggtggcggatcgtctc
atgatgcaagccgaacggaccctgaacaggcaggagcagcaggccttatatcgcaccctt
caagctcgtctccaggatacccttccgtatgtgcctctctggtttgaagaccattatgct
ctgacgtccgccactatcaccggatatcaattgagtgccgatggcaattttgacggactc
agtcaggtccggtggatgagacctccttcagttccccccaaacacatcgcacggttctac
ccatga
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