Candidatus Nitrospira neomarina: PQG83_02110
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Entry
PQG83_02110 CDS
T09428
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nneo01002
]
PQG83_02110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
PQG83_02110
Peptidases and inhibitors [BR:
nneo01002
]
Cysteine peptidases
Family C82
PQG83_02110
Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PQG83_02110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WNM62563
UniProt:
A0AA96JWI4
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All DBs
Position
476045..477643
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AA seq
532 aa
AA seq
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MVGSAQGQEIAIPHVLEDLIDDMPERYRTELTEIYDDRQYEPLWLSQSQKLNAEGQTLLQ
ILKGAEQLGLNPTDYDYSELQWLQRTNQLFSEERPVFRTNVLARLEVVLSKKFLKMLDHV
TSGRLTPGQTNEKWYLQDERPLLTRIMLQTLETGVTATLDSLAGAHEGYKPLLHALEEYL
TIKAEGGWPAIPDGPLLLKGTNSERVKVLRRRLAATGDMKEGADHTKIFDQEVMEGVEKF
QSRHGLAVDGIVGPTTLHTLNIPVESRIQQLLVNLERRRWMPRTLGPDYIVVNIPDFRLM
AYRDGTSQLEMPVIVGKPMTQTPIFTDILEYLVFNPYWNVPISIVRDEILPKFQEDPTYL
AERNFEVVDVDEQPMDIAHLTSENIQNGTIRIRQKPGPNNALGLVKFMFPNDHAIYLHDT
PADHLFDASERDFSHGCIRVERPTDLAAFLLNEQWNQKDIVLALESSERRVIKLSQAIPV
YILYFTVWVAQDGTLQFRHDPYGHDDRLWAALRPLLSLAKNPINLFRQHSAG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagtgcccaaggtcaagaaattgccatcccccatgttctggaagacctaatt
gatgacatgccggaacgctaccggacggagttaactgagatatatgatgaccggcagtat
gagccgttgtggctctcgcaatcacaaaagctgaatgcagagggacaaacgctacttcag
attctaaagggagccgaacaattaggattaaacccgaccgactatgattattctgaactc
cagtggttacaacgaaccaaccaattgttctctgaagaacgtccggtattccgaacgaat
gttcttgccagattggaagtcgtcctttcgaaaaaatttttgaaaatgttggatcacgtc
acgtcgggacgtttaaccccgggccaaaccaacgaaaagtggtatttgcaagatgagaga
ccactcctcactcgcataatgctgcaaacccttgaaacgggggttacggcaaccttggat
tccttagctggggcccatgaaggttataagcccttactgcatgcgcttgaagaatatctc
acaattaaggccgagggcgggtggccggctattcccgatggaccgttgcttctcaaaggg
acaaacagtgaacgagtaaaagttctacgaaggcgattggctgcgacaggagatatgaaa
gaaggggccgatcatacgaaaattttcgatcaggaagtgatggagggagtagaaaaattt
caatcccgacatggtctagccgtagacggaatagtcggacccaccacattacatacgttg
aatatcccggtcgagtcacgtattcaacagctgttggtgaatttggagcggcgccgttgg
atgccgagaacattgggtccggactatatagtagtgaatattccggattttcgactcatg
gcctatcgtgacggaacatcacaattggagatgccggtcatcgtaggaaagccgatgacc
caaactcccattttcactgacattctggaatatctggtattcaatccatattggaatgtc
ccgatcagcattgtccgggatgaaatccttccaaaatttcaagaagatccaacctatctc
gctgaaagaaattttgaagtggtagacgtggatgaacagcccatggacattgctcacctg
acttccgaaaacattcaaaacggcacaatacgtattcggcagaaaccgggcccgaataat
gcgctaggattggttaagttcatgtttcccaatgatcatgccatttatcttcacgataca
cctgccgatcatttgttcgatgcgtccgaacgggattttagccatggttgtatccgcgtt
gaacgaccgacggatttggcggcatttcttttgaatgaacagtggaatcaaaaggatatc
gtgcttgcactcgaaagttcagagcggcgtgtcattaaactttctcaagctataccggtg
tatattttgtattttacggtctgggtggctcaggacggaacgcttcaattccgtcatgat
ccttacggtcacgacgatcgtttatgggctgccttgcggcccctcctatctctggccaag
aatccaatcaatctatttcgtcaacattctgcagggtaa
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