Candidatus Nitrospira neomarina: PQG83_03125
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Entry
PQG83_03125 CDS
T09428
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
nneo
Candidatus Nitrospira neomarina
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA
AAA_16
HTH_30
AAA_2
AAA_3
MCM
AAA_22
HTH_28
nSTAND6
AAA_7
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WNM62755
UniProt:
A0AA96GLR2
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Position
692930..694318
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AA seq
462 aa
AA seq
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MIDTEGGVGRGILVVEDDEQLQSALTHALSQHGYAVTVARDGYEGLERMEREAPWLVLTD
LNLPGKGGMDFLREVRSQGYHMPVVVMTAYGGVDAAVEALKYGATDFLQKPFPLDRLEKL
IDQLKDAQPVSGLEVLREQERCRREEPREGFLTRDPKVLNTISMLEMVAASPATILIQGE
SGTGKEVLARHVHRHSPRASQPFVAINCAALPEGLLESELFGYEKGAFTGALARRCGKFE
LAHQGTLLLDEIGEMSLGLQAKLLRVLQEREVDRLGSRQPVQVDVRVIATTNRNLAQEVQ
SGRFREDVYYRLSVMPFTIPPLRDRPEDVQLLAEYFANRSLRRNRRTPCEISDEAMAYLK
RRPWRGNVRELENVIERGVLLAGNGPLLIEHFQFEEPMLAANHASAPSGTIWEMERELIL
RTLERHDGNRTHAARTLGISIRTLRNKLREYRQLNGGLSLSI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataccgagggtggagtgggccggggtattctggtcgttgaagatgatgaacag
ttgcaatcggccctgactcacgcgttgagtcagcatgggtatgccgtcacggttgccaga
gatggctatgaaggattggagcggatggaacgtgaggccccctggctggtgctgactgat
ctgaatttgcccggcaaaggaggaatggattttttacgagaagtccgaagccagggttac
catatgccggtggtggttatgaccgcctatggtggagtggatgcagccgtcgaggccctc
aaatatggggcaaccgattttcttcaaaagccatttccccttgatcgtctcgaaaaactc
atagaccaattgaaagatgcgcagcctgtgtcagggctggaggttctgagggaacaggaa
cgatgtcgccgtgaagagccgcgcgaagggtttctgaccagggatccgaaagtgttgaac
acgatcagcatgttggagatggtggcggccagcccggcaaccattttgattcaaggcgaa
agcgggacgggaaaggaagtcctggcccggcatgtccatcgtcatagtcccagggcttct
caaccatttgtggcgatcaattgtgccgccctgccggaaggactcttggaaagtgaattg
tttggctatgaaaagggggcctttaccggtgcgctggcgagacgatgcggcaagtttgaa
ttagctcaccagggaacattgttgttggatgaaatcggagaaatgagtttgggattacaa
gccaaattactcagggtccttcaagaacgtgaagtggatcgccttggctccaggcagccg
gtgcaggtggatgtgcgggtgattgccacgactaatcggaatttggcgcaggaagttcag
tccggccggtttcgtgaggatgtgtattaccggttgagtgtcatgccgtttaccattccg
ccattgcgtgatcgcccggaggacgttcaattattggcggaatattttgccaatcggtca
ttgcggcgaaaccggcgcacgccgtgcgagatctcagatgaggcgatggcctatttaaaa
cggcggccgtggcgaggaaacgtacgcgaactggaaaatgtgattgagcggggtgtgtta
ttagccgggaatggaccattactgattgagcattttcagtttgaagaacccatgttggcg
gccaatcatgccagtgcgccaagtgggactatctgggaaatggaacgagaactcattttg
agaactctggagcgccatgatggaaatcggacgcatgcggccaggacattgggaatcagt
attcgtaccttacggaataaattacgggagtatcgacagttaaacggggggctttccctg
agtatttaa
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