Candidatus Nitrospira neomarina: PQG83_03670
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Entry
PQG83_03670 CDS
T09428
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PQG83_03670 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nneo02000
]
PQG83_03670 (msbA)
Enzymes [BR:
nneo01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PQG83_03670 (msbA)
Transporters [BR:
nneo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PQG83_03670 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_29
AAA_15
AAA_30
AAA_25
MobB
AAA_33
NB-ARC
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WNM62861
UniProt:
A0AA96GSQ6
LinkDB
All DBs
Position
812060..813814
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AA seq
584 aa
AA seq
DB search
MKTFWRIVSYLKGYRLRLLGAFVCSAGVAGLSAVYAWLVQPVLDGIFIERNQEMLLILPL
AVLGVAILKASFAYGQGYLMSYVGHWLVSDIRQQLFIHIVRLPIRFHDANTSGRLMARVI
SDVNEMANAIPSVLKDIFQQGLTFVAMLSVVFYQNWKLATIVLVVLPFSSLVLIRVGRRI
RKLSKRGQESIGRMASVLKEAFSGIKIVKAYGQEEKEADRFSLTNQAFRTAKVKSSQTSA
MASPLLEVIGVCGVAFIIWYGGGLVIAGEMKPGEFFSFLAAMFMAYAPLRKMSGANESVQ
RALAGAQRVFQVLDLESELAKDEGKKILPPMTKNLEFSGVNFRYEGSDEAALHGINFTIN
VGEVVAFVGASGSGKTTLVSLVPRFYRPTEGAVKIDGEDIRLVDRSSLRRQIGIVSQETV
LFDDTIRNNIAYGRLDASEEAVIEAARAAFAWEFIERLPQGLDTLVGENGLRLSGGQRQR
LAIARAILRDPPILILDEATSALDSESEKLVQKALANLVKARTTLIIAHRLSTVQHADRI
VVMNRGKIEEIGTHATLLQQGGLYTRLYQTQFLLTQPEPLPTTS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttctggcgaatcgtgtcttatctgaaggggtaccgcctgcggttgcttggc
gcgtttgtctgttctgccggggtggcaggattatcagcggtctatgcgtggcttgtccaa
ccggttctggatggaattttcattgagcgcaatcaagagatgttgctcatccttccgttg
gctgtcctgggtgtcgcaattttgaaagcctcttttgcctatggacagggttatctcatg
agttatgtgggccactggctggtgtccgatattcgccaacaattgtttattcatatcgtg
cgcctgcctattcggtttcacgatgcgaatacgtcaggacggttgatggccagggtgatt
agcgatgtcaacgaaatggcaaatgccattcccagtgtgttgaaggatatctttcaacag
gggctcacgtttgtggcgatgctgtccgtggtcttttatcaaaattggaaactcgcgacg
attgtgttggtcgtattacccttctcttcattggtgttgatccgcgtcggccggcggatt
cgaaaactttcaaagcgtggtcaggaatccattggaagaatggcttccgtcttaaaagaa
gcgttttccggtatcaagatcgtgaaggcctacggtcaggaagaaaaggaggctgaccga
ttctcgttgacgaatcaagcctttcggacagcaaaagtgaagtcgtctcaaacctcagcg
atggcctctccacttcttgaagtcattggagtctgcggtgtggcctttattatctggtat
gggggaggattagtcattgccggagagatgaagccgggagagttcttttcctttttggct
gccatgttcatggcgtatgcccctctccggaaaatgtccggggccaatgagtcggttcag
cgtgcgcttgcgggggctcagcgagtgtttcaagtcctggatctggaaagtgaattagcg
aaagacgagggcaaaaaaattcttcctcccatgacgaaaaatttggaattttccggtgtc
aacttcaggtatgagggctctgacgaggcggccttgcacgggatcaatttcacgatcaac
gtcggggaagtggtggccttcgtcggggccagtggtagtggaaaaaccactctcgtgagt
ttggtcccacggttttatcgcccgacagaaggagccgtgaaaattgatggtgaggatatt
cgcctggttgatcgatcgtcgctgaggcggcagattggcatcgtgtctcaagaaaccgtg
ttatttgatgatacgatcagaaataatatcgcctatggccgtctggatgcgagtgaagag
gcggtcattgaggcggctcgcgccgcctttgcctgggaatttattgagcggctccctcag
gggctggatacgctggttggtgaaaatggactacgattatcgggaggacaacgtcaacga
ctcgcgattgccagggccattctgcgggatcccccgattctgattctggacgaggcgacg
tccgctctggattcggaatctgagaagttggtgcaaaaagctctggcaaatctggtaaaa
gcccgaacgaccctgatcattgcccaccgattgtccacggtgcaacatgccgatcgtatt
gtggtgatgaatcgcggaaaaattgaagagatcggcactcatgccaccttgcttcaacag
ggaggcctctatactcgattgtatcaaacgcaatttttactaactcaacccgaaccgtta
ccgacgacctcctaa
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