Candidatus Nitrospira neomarina: PQG83_03935
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Entry
PQG83_03935 CDS
T09428
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00500
Starch and sucrose metabolism
nneo01100
Metabolic pathways
nneo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PQG83_03935 (glgX)
Enzymes [BR:
nneo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PQG83_03935 (glgX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
WNM62912
UniProt:
A0AA96GKY2
LinkDB
All DBs
Position
870064..872199
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AA seq
711 aa
AA seq
DB search
MRIWPGRSYPLGATWDGQGVNFALFSENATGVDLCLFDNELQEQETQRIPIEERTDQVWH
VYLPEVRPGQLYGYRVHGPYDPEAGHRFNPAKLLIDPYAKSLTGVVRWSDSMFGYRLGDP
AGDLSFDDRNNAANIPKGVVVDQAFSWGGDQRLNTPWEQTVIYEVHVKGMTMRHPDVPEA
LRGTYAGLASPAILEYFQSLGITAVELLPVHHFVNDLYLKEKGLTNYWGYNSIGYFAPDI
RYSAFPGGGEKVDEFKSMVRKLHSSGIEVILDVVYNHTGEGNHFGPTLSFRGIDNASYYR
VSPDNPRYYMDYTGCGNTLNVRHPRTLQLIMDSLRYWVNDMHVDGFRFDLASALARELHD
VDRLSAFFDIIHQDPVLSQVKLIAEPWDLGEGGYQVGNFPPGWAEWNGKYRDSIRRYWKG
DGGLLGEIANRWSGSSDLYGESGRQPYASINFVTAHDGFTLQDLVSYDHKHNEDNQEGNR
DGTDDNDSWNCGVEGPTEDPAIQELRDRQVRNFFATLLLSQGVPMICGGDELGRTQQGNN
NAYCQDNELSWLNWNLTRSQLGLLDFVKMLIDIKKTHPVFQRRRFFQGRRIEDSEVKDVA
WFGSHGKEMSHEDWQMGHRTLGIRLAGDAIVEKDSQGRPIVDETFLVLINAHHEDVDFIL
PAHTKSVRWELEFDTAVPVDKKNPKHSKLLKGGQPYHLISRGLALFRTPKS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttggccaggtcgatcatacccgctcggtgccacatgggacgggcagggagtt
aattttgcactgttttccgaaaatgcaaccggtgtggatctttgtctgtttgacaatgaa
cttcaggagcaggaaacccaacggattcctattgaggaacgaacggatcaagtctggcat
gtctatttacctgaggtgcgtcctggccaactttatggataccgggtgcatgggccctat
gatccagaggcggggcaccggtttaatcctgccaaacttctgatcgatccgtatgcgaaa
tccttgacgggtgttgtgcgatggtccgattccatgtttggttaccgtcttggcgatccg
gcaggtgacctgtcattcgatgatcggaacaatgcggcaaacattcctaaaggggtggtc
gtcgaccaggcctttagctggggaggagaccaacggctgaatactccatgggagcagacg
gtcatctacgaggtccacgtcaagggaatgacgatgcggcatccggatgttcctgaagca
ttgcgtggaacctatgcgggcttggcgtctccggcgattcttgaatattttcaatcgttg
gggattaccgcagtggaattgttgccggttcaccattttgtgaatgatctctatctgaaa
gagaagggcctcacgaattattgggggtacaactccatcgggtattttgcacctgacatc
cggtattcggccttccccggtggaggagaaaaggtcgatgaattcaaatccatggttaga
aaacttcacagttccggcatcgaagtcatcctggatgtcgtctataaccataccggagaa
gggaatcacttcgggccgacgttatcattccggggaattgataacgcctcctattaccgg
gtgtctccggacaatccacgctattacatggattacaccggctgtggaaatacgttgaat
gtccgacatccacggaccttgcagttgattatggacagtttgcggtattgggtgaatgat
atgcatgtggatggtttccggtttgacctggcatccgcgctcgcacgggaattacatgat
gtggatcgactcagcgccttttttgacatcattcaccaggatccggtgttgtcacaggtg
aagctgatcgccgaaccctgggatctgggagaaggcggctatcaggtgggaaattttcct
cctgggtgggccgagtggaatgggaaataccgcgattccattcgccggtattggaaagga
gatggtggattgcttggggaaattgccaatcgttggtccgggagtagcgatctctacgga
gaaagtgggcgacaaccctatgccagtataaattttgtgaccgctcatgacggatttacc
ctccaggatttggtgtcgtatgaccacaagcataatgaagacaatcaggaaggaaatcgg
gatggaaccgatgataatgatagttggaattgtggtgtggaaggcccgacggaggatccc
gcgatccaggagttgcgtgaccggcaggtccggaattttttcgcaaccttactgttatcc
cagggagtaccgatgatctgtggcggggatgaattaggtcgtacgcaacaggggaataat
aacgcctattgccaggataacgagttgagttggctgaattggaacctgacgcgatcccaa
ctcggattgctggactttgtgaagatgctcattgacattaaaaaaacccatccggtgttt
caacgacgaaggttttttcaagggcgccggatagaagattcggaagtgaaggatgtggcg
tggttcggatcgcatggaaaagaaatgtcgcatgaagattggcagatggggcatcgaaca
ttgggaatacgattggccggggacgccatcgtagagaaagacagtcaagggcgaccgatt
gtggatgagacgtttttagtattgataaacgcccatcatgaggatgtggacttcatactt
cctgcccacaccaagtcggtgcggtgggagttggagttcgacaccgctgtaccggttgac
aagaaaaatcccaagcattcgaaattattgaaggggggacaaccctatcatttaatttct
cgagggctggccttgttccgaactccgaaatcctga
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