Candidatus Nitrospira neomarina: PQG83_04415
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Entry
PQG83_04415 CDS
T09428
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQG83_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_04415
Enzymes [BR:
nneo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PQG83_04415
DNA repair and recombination proteins [BR:
nneo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQG83_04415
Prokaryotic type
PQG83_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF1075
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WNM63002
UniProt:
A0AA96GL48
LinkDB
All DBs
Position
991500..992216
Genome browser
AA seq
238 aa
AA seq
DB search
MAKIIKPQSKKKSGPHAKAIQGIPKSKKTQFQKRLLTWYGEFGRDLPWRRTSDPYKILVS
EVMLQQTQVDRVIPKFHEFLGKYPTLQDLAVAHPDDIRRTWYPLGYNIRPYRLHGIACET
IERYGGIIPSKADELLSLKGIGRYTAGAIRSFAFNKDAPILDTNVMRVLHRIFIGKGEAK
KQKTELWVLSETLIPRGKGYDFNQALMDFGAMMCTARKPTCLLCPMRNICLTVSSDER
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagataataaaacctcagagtaaaaaaaaatccgggcctcatgctaaggctatt
cagggaattccaaaatctaaaaaaacacaatttcagaaacgcctcctgacctggtatggg
gaattcgggcgggatctcccatggcggagaaccagtgatccgtataaaattctggtttct
gaggtcatgttgcaacagacacaggtggatcgggttataccgaagttccatgaatttctt
gggaaatatcccactctgcaggatctagcggtcgcgcatcctgatgatattcgcaggacg
tggtatcccctcgggtacaatattcgaccataccgtcttcatggcattgcctgtgagacg
attgagcgttatggcggaataattcccagtaaggcagacgagctgctttctctaaagggc
attggtcgttataccgcaggagccatcagatcattcgcgtttaataaagatgcgccaatt
ctagacactaacgtgatgcgggtattgcaccggatatttattgggaaaggggaggccaaa
aagcagaagaccgagttatgggttctctctgaaacactaattcccagaggcaaagggtat
gattttaatcaggcgttaatggattttggggctatgatgtgtacggccagaaaacccacg
tgtttattgtgtccaatgaggaatatttgtctcaccgtttcttcggacgaaaggtag
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