Candidatus Nitrospira neomarina: PQG83_05865
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Entry
PQG83_05865 CDS
T09428
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00061
Fatty acid biosynthesis
nneo00071
Fatty acid degradation
nneo01100
Metabolic pathways
nneo01212
Fatty acid metabolism
nneo02024
Quorum sensing
nneo04146
Peroxisome
Module
nneo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PQG83_05865
00071 Fatty acid degradation
PQG83_05865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PQG83_05865
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQG83_05865
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nneo01004
]
PQG83_05865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nneo04147
]
PQG83_05865
Enzymes [BR:
nneo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PQG83_05865
Lipid biosynthesis proteins [BR:
nneo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PQG83_05865
Exosome [BR:
nneo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PQG83_05865
Exosomal proteins of breast cancer cells
PQG83_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
AMP-binding_C_3
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WNM63279
UniProt:
A0AA96GIX9
LinkDB
All DBs
Position
1318452..1321106
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AA seq
884 aa
AA seq
DB search
MTLIHSLKEGGDAPAIEFLIKKESGTWSFQHLGETSERLAAGMMKAGLTRGSHAVLLAPN
GPEWIAAVCGLIRAGGIPIPVDPQMSKEDLSHVLADSEGSWIFTTSPILSILQDQHHDKN
RNIVLLDADIRHQQSWRRLIVDSETTGSQVSPDDTAILFYTSGTSGRPKGVPLTHRNLTS
NLHALLSLDIIQHHDRLLVPLPFHHVYPFTIGLLVALAAKIPLILPYSLTGPQLLRALRK
GNPTVMLGIPRLYEALYTGIENKVVQRGKLVATGFRILLGLSTFLRRRLGIRIGRLFFSS
LHREVAPRLHTLVSGGSALPPETGWKLEGLGWRVGTGYGLTETSPILTLQKPGEGDLDTA
GRPLSGVDVKLAEPSSQSQHGEVLAKGPNVFAGYRNLPEKTQQSFTKDGYFRTGDLGEWK
GSCLKLVGRSSSMIVLSGGENIRPDTIEDELNQIEAIQESAVLDQDDKLVALIVPKNGHS
TNEPTKMTKQIEQDIHHRMRQLPSHHRLTDFAISFEPLPRTRLGKLRRHKLATLYDQAKQ
GKGVVKAEQHGPMPVYQMSSEDQQLLADSQARQAWDWLASRFHTARLTPDSHIQMDLGVD
SLEWVNLSLEIQEGTGVEMDQDTIGRIQTVRDFLQAMAEAETGGHGGNLLQQLQDPYALL
DEHQRAWMTPLGTFGQFVFRILWGLNRGLMRMVYQVTARGTDRLPEEQFMLIANHVSLLD
PLALHAVLTPQRLANMYWAGWTEVMFRNMLMRRISRFTHVVPINPQKGPLSNAAMGLATL
KEGHCLGWFPEGRRSADGRLQPFQSGIGLILEQHQVPVVPVWIAGTYDAWPVHRWFPRPG
KISVSFGTPLSVQKVKEKGKGDQPHQKIADGLHQELVALSRNSS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgactcttatacactcccttaaagagggaggggatgctcctgccattgaattcctcata
aaaaaggaaagcgggacctggtcttttcagcacctgggggaaacgagtgagcgattagcc
gccggaatgatgaaagccggcctcacaaggggatctcatgccgttctgctcgctcccaat
ggcccggaatggattgccgcagtctgcggattgattcgcgcgggcgggatccccattccg
gtcgacccgcaaatgagcaaagaggatctctcgcatgtgctggcggattcagaaggatcc
tggatttttacgacgtcgcctattctgtcgatccttcaggaccaacaccacgacaagaac
cggaatattgttttgctggatgccgacatacgccatcaacagagctggcggcgattgatc
gtagattcagaaacgacaggttcacaagtctcaccagacgatacggccatattgttctat
acgtcaggcacatccggccggccgaagggcgtgcccctcacgcatcgtaatctgacatcg
aatcttcacgcgttgttatctctcgacatcattcaacaccatgatcggcttctggtcccg
ttgccctttcatcatgtctatccttttacgatcggattgctggttgcgctcgccgccaag
attcctctgatccttccttattcgctgaccggtccgcaattattgagagccctccggaaa
ggcaatccgaccgtgatgttgggtattccgcggttatacgaagccttatacaccggtatt
gaaaataaagtggtacaacgcggaaagctggtggccacaggattccgtatcctccttggt
ctatcgacttttctgcggcggcgactgggaatacgtatcggacgactcttcttttcatcc
ctgcaccgggaggtggcaccccgtctgcacacgctggtatccggaggctcggccctccct
ccagagaccgggtggaaacttgaaggcctgggttggcgggtcggaacgggatatggactg
acggaaacatctccaatcctgaccttgcaaaagccgggtgagggagatttagacacggca
ggacgcccgctttccggtgtcgatgtgaaactggctgaaccttcatctcaaagccaacac
ggggaagttcttgccaaaggaccgaatgtctttgccggataccggaatttgcctgaaaag
acacaacaatcttttaccaaagacggctattttcgtaccggagatttaggagagtggaaa
ggatcctgtctcaaactggtcggccggtcttcatccatgattgtgctttccggaggggaa
aatatccgtccggacacgattgaagacgaattgaatcagatcgaagccattcaggaaagc
gccgtactcgatcaagatgacaaattggtcgcgttaatagtgccgaagaacggtcactcc
accaatgaaccaaccaagatgaccaaacaaattgaacaggacattcatcaccgcatgcgc
cagctcccttctcaccaccggcttaccgattttgcgatcagttttgagccgcttccccgg
acccgcctgggaaaactccggcgacataagctggcgacgctgtacgaccaggcgaaacag
gggaaaggtgtggtcaaggcggaacaacacggccccatgcctgtttatcagatgtcctca
gaagaccagcaactgctagccgactcgcaagccagacaggcctgggattggctggcttcc
cgttttcacacggcccggctcacgcctgattcacatatacaaatggatcttggtgtggat
tcattggaatgggtgaatctttccctggaaattcaggaaggaaccggcgtagagatggac
caggacacgatcggccgcatccagaccgtccgtgattttttacaggccatggcggaagca
gagactggcggtcacggcggaaatctcctccagcaactgcaggatccttatgccttgttg
gatgaacatcagcgcgcctggatgactccgcttggcaccttcgggcagtttgttttccgg
attctgtggggactgaatcgtgggttgatgcggatggtctatcaggtcacagcccggggg
acggaccggctccccgaggagcagttcatgctcatcgccaatcatgtcagtttgctggat
cctctggcccttcatgccgttctcacgccacaacgactcgccaatatgtactgggcaggc
tggacagaggtgatgttccggaacatgctgatgcggcggatcagccggttcactcatgtc
gtgcctatcaaccctcaaaaaggtccgctttccaatgcggccatgggattggccacatta
aaggaggggcattgccttggctggttcccggaagggaggcggtctgctgacggccggctg
cagccgtttcaatccggcattggattgatcttggagcagcatcaagtgccggtggtcccg
gtctggatcgcgggcacctatgacgcctggccggttcaccggtggtttccgcgtccaggg
aaaatttctgtgtcattcggaacaccgctttcggttcagaaggtgaaggaaaagggaaaa
ggagatcagccgcaccaaaaaatcgccgacggacttcaccaggaactagtggcactctcg
cgaaacagttcatga
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