Candidatus Nitrospira neomarina: PQG83_05955
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Entry
PQG83_05955 CDS
T09428
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQG83_05955 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_05955 (recO)
DNA repair and recombination proteins [BR:
nneo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQG83_05955 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PQG83_05955 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
ArfGap
Motif
Other DBs
NCBI-ProteinID:
WNM63297
UniProt:
A0AA96JWX8
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All DBs
Position
complement(1337986..1338735)
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AA seq
249 aa
AA seq
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MPLLRTRAVIIRSQRWGDADRIVTLYSADLGKIRGAARGARRMKTRFGGVLEPFGIVDVT
LFQKTPDALGQISQIDLVRNFRALREDLNVMAAAAKMVHMVEMITADRDPNPEMYSSLIY
ALEHLVPERDLGLTTLLFQIHVLGYTGFRPQIDRCTECGTIASPHMPQWFSPRLGGMVCH
GCGQRGIGRLLSISKGSLAFIEQARRLPMASLSRLKAIGTVRVEVEEAIEAYFQAVVGKA
LPTFEQWVS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttaagaactcgcgcggttattattcgaagccaacgatggggtgatgctgac
agaattgtcactctgtattccgccgatttgggaaaaattcgaggcgccgcacgtggtgca
cgccggatgaagacacgcttcgggggggttcttgagccttttgggattgttgatgtcacg
ctatttcaaaaaaccccagacgcgttggggcaaattagtcaaatagatctggtcagaaac
tttagagctctacgagaagatttaaatgtgatggcagccgctgccaagatggtgcatatg
gtggagatgattacggccgatcgtgatcccaatccggaaatgtattcatcactgatatat
gccctggaacacttggttcctgagagagacctgggcctcaccacattattatttcaaatt
catgtgctgggctatactggttttcgtccacaaattgatcgatgtactgaatgcggaact
attgcctcccctcatatgcctcagtggttttctcctcgattaggggggatggtctgccac
ggttgtggtcaacggggtatagggcggttactgtcaatttctaaaggcagtttagcgttt
attgaacaagctcgacgcctccctatggctagtttgtcacgactaaaagcgatcggaacg
gtcagggttgaggtggaggaggcgattgaagcctactttcaggcggtcgtcggaaaagct
cttccaacatttgaacaatgggtctcctaa
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integrated database retrieval system