Candidatus Nitrospira neomarina: PQG83_06885
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Entry
PQG83_06885 CDS
T09428
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02020
Two-component system
nneo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PQG83_06885
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PQG83_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nneo03021
]
PQG83_06885
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nneo02035
]
PQG83_06885
Transcription machinery [BR:
nneo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PQG83_06885
Bacterial motility proteins [BR:
nneo02035
]
Flagellar system
Flagellar assembly proteins
Stator
PQG83_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
LexA_DNA_bind
Sigma70_ECF
GcrA
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WNM63472
UniProt:
A0AA96GLG2
LinkDB
All DBs
Position
complement(1533713..1534591)
Genome browser
AA seq
292 aa
AA seq
DB search
MDEDAQHSTETTVGIKEPDTSHLCSVSPKKVEHTEAQGQLDQEYVTRILLEFLPIIRRMA
GIMAFRNPFSLDVEDLTSAGAMGLLSALKRYDPTRDIKFRTFAEYRIRGMMLDEIRSMDW
VPRSVRFRRDQVRQIVEEHLQKNGVPPTTQELATLLGVPIEEIEGVGGCDPRLISLDEPV
GQGEDECTLRDVLPDVNHLDPFVACADAEMKAALSAALQTLSARQQEVLQSYYHAGLTMK
EIGRQMGLTESGVCRVHSGAIRHLRIELKRIEDGGPSAPRPRNLRKTPVVRD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacgcacaacattccacggagacaacagttggtatcaaagaacccgacaca
tctcacctctgttcggttagtccgaaaaaagtagaacatacggaggcacagggccagctc
gatcaggaatatgttacccggattttattagagtttctcccgatcattcgtcggatggcc
ggaattatggcattcagaaatcccttttccctggatgtcgaggatttgaccagcgcaggg
gctatggggctgttgtcggcgttgaagcgctatgatccgacacgtgatattaaatttcgc
acatttgccgaatatcgtattcgtggcatgatgttagatgaaattcggtctatggattgg
gttcctcggtctgttcgatttcgtcgagatcaagtgcgacaaatagttgaagagcatctt
cagaaaaatggggtgccaccgaccacacaggaattggccacactgttgggcgtccccatt
gaggagatagaaggagtgggcgggtgtgatccccggttaattagtctggatgagccggtt
gggcagggggaagatgaatgcacccttcgtgatgttttgccggacgttaaccatctggac
ccttttgtggcctgtgcggatgcagaaatgaaagcggccctgtcagcggcgctccagaca
ttatcggcacgccagcaagaggtgcttcaatcgtattatcatgcgggattgacgatgaaa
gaaattggtcggcaaatgggtctgaccgaatctggggtctgccgggtgcattccggtgcc
attcgacatctacgcatagagttgaaacgtatagaggatgggggacccagtgcgccccga
cccaggaatttgcgaaaaacacccgtggtccgtgactaa
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integrated database retrieval system
