Candidatus Nitrospira neomarina: PQG83_06925
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Entry
PQG83_06925 CDS
T09428
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PQG83_06925 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nneo01007
]
PQG83_06925 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nneo03016
]
PQG83_06925 (aspS)
03029 Mitochondrial biogenesis [BR:
nneo03029
]
PQG83_06925 (aspS)
Enzymes [BR:
nneo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PQG83_06925 (aspS)
Amino acid related enzymes [BR:
nneo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PQG83_06925 (aspS)
Transfer RNA biogenesis [BR:
nneo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PQG83_06925 (aspS)
Prokaryotic type
Other AARSs
PQG83_06925 (aspS)
Mitochondrial biogenesis [BR:
nneo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PQG83_06925 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WNM63479
UniProt:
A0AA96K4L8
LinkDB
All DBs
Position
1545695..1547470
Genome browser
AA seq
591 aa
AA seq
DB search
MKRSHHCGELSIDHVGQIVTLAGWVASRRDHGGVRFIDLRDRYGLTQIVFDSEQQPTVHQ
LADRLRNEYVVAITGEVALRPEGSANPHIPTGAIEIRSTSLVILNEAKPLPFALDDTITT
TETLRLKHRYLDLRRPKMQELLQLRSQVSHLVRQYLHGNQFIEVETPILTKSTPEGARDY
LVPSRVNPGEFFALPQSPQLFKQILMIGGTDRYYQIARCFRDEDLRLDRQPEFTQIDLEM
SFVDQEDIMQLIEHMVRLVFKETKNIDLPSPLPRLSFEEAMGRYGTDKPDLRFDLQLQDL
SQFAATCDFKVFKSAAENGGIVKALVIPGGNAFTRNRIDNLIGTAKEFGAKGLAWVKINE
EGNLDSSIAKFFNSQTLRDALPSAKTGDLLIFVADQAPIVHQVLGRLRLLLGEELGLIDR
NRWEPLWVIDFPMFEFDDTAKRYIALHHPFTAPHSEDMPLLETDPLQIRTQAYDLVLNGF
ELGGGSIRIHAPQVQSKVFDLLNISKTEAREKFGFLLDALESGAPPHGGIALGLDRLVML
LGKTESIREVIPFPKTQKAQCLMTEAPSPVTTEQLQELSIRTTAKKPDNPV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgatcacatcattgcggtgaactctccatagaccatgtaggccaaatcgtgacc
ttagccggctgggttgccagtcgccgcgaccatggcggagtgaggttcattgatcttcgt
gatcgctacggcctcacacaaatcgtgtttgattcagagcagcaacccaccgtccatcaa
ctagccgatcggctccgcaatgaatacgtcgtggcaatcaccggtgaggtggccttacgt
cccgaaggctcagccaaccctcatattccgactggcgccatagaaattcgaagcacatcc
ctcgtgattctcaatgaagccaaacccctcccctttgccctcgacgacaccatcaccacc
actgaaacacttcggttaaaacaccggtatctggaccttcgccggccaaagatgcaagaa
ctccttcaactccgcagtcaggtgtcccatcttgtacggcaataccttcatggcaatcag
ttcatagaggtggaaacaccgattttaacaaaaagcactcccgagggcgcacgagattat
ctcgtcccgagtcgagtcaaccctggtgaattttttgctcttccccaatcgccgcaactc
tttaagcagattcttatgatcgggggaactgatcgttattatcaaatagccagatgcttt
cgtgatgaagacctccggttggaccgccagccagaattcacgcaaatcgatctggaaatg
tctttcgtcgatcaggaagatatcatgcagttgatcgaacatatggtcagactggttttt
aaagagacgaaaaatattgaccttccctccccattgccccggctgtcctttgaggaggcc
atgggacgctatgggaccgacaaaccggatcttcgctttgatctgcagttacaggacctg
agtcaattcgctgcaacctgtgactttaaagtttttaagagcgcagcggaaaacggcgga
atcgtgaaagccctcgtcattcccggtggcaacgcctttacccgcaaccggattgacaat
ctaatcggtaccgcaaaagaatttggtgccaagggactcgcctgggtcaaaattaacgaa
gagggcaatctggattcctctatcgccaaattctttaattcccaaaccctacgtgacgcc
ctaccctcggccaaaaccggggacctgctcatctttgtcgcagatcaagcgcctatcgtc
catcaagtcttaggccgccttcgcctgctgctgggggaggagctaggattaattgatcga
aaccggtgggaaccgctatgggtcatagactttcccatgtttgaatttgacgatacggcc
aaacgatatatcgctctgcaccatccctttacggcccctcactcagaagatatgccgctt
ctggaaaccgatcctctccagattcgaacgcaagcctatgacctggttttgaatggcttt
gagttaggtggaggaagcattcgaattcatgcgccacaagttcagtcaaaagtctttgac
ttactcaacatctccaaaacggaggctcgtgaaaaatttggatttctcttagatgccttg
gaatccggggcaccgcctcatggaggcatcgcgttgggacttgatcggttggtgatgtta
ctcggcaagacggaatcgattcgagaagtgatcccgtttcccaaaacccagaaggctcaa
tgcctgatgaccgaagccccctcccccgtcacaacagaacaactacaggagctctctatt
cgcacgacggctaaaaagcctgacaacccggtttaa
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