Candidatus Nitrospira neomarina: PQG83_07055 Help Entry PQG83_07055       CDS       T09428                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism nneo  Candidatus Nitrospira neomarina Pathway nneo03018   RNA degradation Brite KEGG Orthology (KO) [BR:nneo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PQG83_07055  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nneo03019]     PQG83_07055 Enzymes [BR:nneo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      PQG83_07055 Messenger RNA biogenesis [BR:nneo03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      PQG83_07055 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 Methyltr_RsmB-F HEM4 P-loop_SecA Motif Other DBs NCBI-ProteinID:  WNM63504 UniProt:  A0AA96GJC5 LinkDB All DBs Position complement(1579622..1580893) Genome browser AA seq 423 aa AA seqDB search MSSTALSQFGALGVSATLVGVLNKLGLTEPTPIQVQAIPPALEGRDVLGCAQTGTGKTAA FVIPIIERLVDGPKGHPRAMILAPTRELAFQIQETVDKFGRVRGIFATTLVGGADMHAQV RGLRQRPDIIVATPGRLLDHMWQGTVSFTKLRMVVLDEADRMLDMGFAPQLNQIIEALPE TRQTLLFSATMPNNLADLARMSLNDPFKALVAKSATPAEGVTHTVHHTANSDKTSLLLSI LKETEGSVLVFTRTKHRADRIGETLEKVGCRVAVLHAGRRLPQRRAALEGFRRGRFEILV ATDIAARGLDVDNIQHVINYDLPHVPEDYIHRIGRTARKNTKGWATSFVTGEDNRSLRMI EKLLGKAVPCAPGSRPPMPAIAPERRGPRPNSAGRGFGTPRSGSPGRHDRPAVRRPRPST LAS NT seq 1272 nt NT seq  +upstreamnt  +downstreamnt atgtcttcaactgcgttgtcacagtttggtgcgcttggtgtgtctgctactttggttggg gtgttgaataagctcggtttaacggaaccgaccccgattcaagtacaggccatccctccg gctttggaaggtcgggatgtgttggggtgtgcccagaccggaaccggaaaaaccgccgcc tttgtcattcctatcattgaacgtttggtagatggtcctaagggccaccctcgtgcgatg attttagcgccaacccgggagttggcatttcaaattcaagaaaccgttgataagttcggg cgtgtgcgcgggatctttgcgaccacgctggtgggtggtgctgatatgcatgcgcaagtt cgtggattacggcaacgtcccgatatcatcgtcgcgacgccgggtcgccttctcgaccat atgtggcaggggacggtttcgtttaccaagcttcggatggtggtcctcgacgaggccgat cgaatgcttgatatggggtttgcgcctcagctcaatcaaatcattgaggcattaccggaa acccggcaaaccttactcttctcggcaaccatgccgaataatttggctgatttggctcgg atgtcactcaacgatccgtttaaagctctggtagcgaaatcggccacaccggctgaaggc gtcacccatacggtgcatcacactgccaattccgataaaacctcactcctgctatctatt ttaaaggagacagaggggtcagtccttgtctttacccggaccaaacatcgtgccgaccgg atcggggaaaccctggaaaaggtcggttgtcgcgtggcagtgttacatgcgggacgacga cttccccaacgccgtgcggcgttggaagggtttcgccggggacggtttgaaattttagtt gcgaccgatattgccgcccgtgggttggacgtggacaatattcaacatgtgatcaattat gatttgcctcatgtaccggaagattatatccatcgtattggtcggacggcgcggaagaat accaaaggttgggccacaagttttgtcaccggtgaagacaatcgttcgttacgaatgatt gaaaaattgctggggaaggcggttccctgcgcacctggaagccgtccgccaatgccggcc attgcaccggagagacgtgggcctcggcctaattccgcgggtagaggatttggtactcct cgatcggggagccctggcaggcatgatcgaccggctgttcgtcgaccgcgtccgtctacc ttagcttcctaa

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