Candidatus Nitrospira neomarina: PQG83_07830
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Entry
PQG83_07830 CDS
T09428
Name
(GenBank) DEAD/DEAH box helicase
Organism
nneo
Candidatus Nitrospira neomarina
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WNM63652
UniProt:
A0AA96GLU0
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Position
complement(1752270..1755806)
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AA seq
1178 aa
AA seq
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MSVEPFGVLEHLKVLSPNHVYFLASKAFVLRGYEYYAQGRLESYSWDRTQSILSATVRGA
TQYLVRFMVHNGQLTFSCTCPVWTPESHCKHVICALLTTVNLLLPDTFRMPSSNSTQRAL
LLRQLMERAGSPLASKPSTPATPPRFEITLCNHHGVSSIRITNHGNICQSFAGMPTELAV
LLRATQDPAWSVQEGLRDFLKHHGQHHALFYEDADGRFPLEWAPDALYTTKTELDILGSH
VSIAACCLRYGEVQPNSYACLGFAADLNAKKLGPLEHEGGWAVYDLLYENSQREQVIEPA
DPLSRPLALPATPQHREGRLSSERPTGMARPTFSIPVEQFITLQLDIPLHEQDRILRSVL
LKCAGQEVALTDHGHSGKAPTYQYRLTFIPEAIPLDASVLDLRTGVLRAECWVGDSQGRP
SVPIFRIFPFLERAKTVSNGLKAKKRRALLYNTFFQLIGHQKPTDARKLIKACIAQDEFR
PFKLKAEAEQILQRFSSPALEPSVRLVVHDGHWCVVMNDWAKEALLYAIPYTLWGPSLFE
GMVEHDEMSLPLSNLYPLLPELHAKLHEVGIGFFYQDQPITTSQWDCSIDARRASSIDWF
ELRPELLCDGVRIEAKDIEKILERGGMMEEDGIIRIVDQNTQAILRAFAFLSNKPNMEHR
EQKAVVRVPKLQILDWVALRKRGVTVILPPADEALINRLLHFEQIEPIPLPQVVDATVRP
YQQEGYRWLGFLYQHRLGACLADDMGLGKTLQAICLFAGIKEGLITAPEPIQGPHLVVLP
PSLLFNWEHEISRFYPSLTIQSYTGKERTSSFAGADVVLTTYGLIRRDIAILEKIPFNVI
LFDEAQAVKNIVARTTGAARRLKGYFKCVMTGTPLENHVGEYYALMDLCVPGLLGDYEEI
RGKMKAPSPALLETIMQRSRPFVLRRTKSQILKELPPKIETDLYLELTDRQKNLYQQTVT
KIRSTIAAAYRSQTPAQARIIALTAILKLRQICLSPQLLGPGHTELSPKLECLLDRLKEL
LDEGHSALVFSQFTSFLDIVEQAFDAHEIPHVRLDGSTPTPTRKKLVQKFQEGASPSIFL
LSLKAGGQGLNLTKASYVFHLDPWWNPAVENQASDRAHRIGQTQKVSIMRLLMRHTIEEK
MMELKQKKLDLYHAVLEGATPHGGGASLSQKDFDFLLE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagaaccctttggtgtcctggaacacctgaaagtcctctctccgaatcatgtc
tacttcctggcttccaaggcctttgttcttcgcggatatgagtattatgcccaaggaagg
ctcgagtcttatagctgggaccggacgcagtctatcttgtcggctacggtgcgaggggcg
acccaatatctggttcggttcatggtgcacaacgggcagctgaccttttcctgtacctgt
ccggtgtggacgccggagtcgcattgtaagcatgtcatttgtgctctcctgaccacagtc
aatctcctgcttcccgataccttccggatgccctcatccaattccactcaacgggccctc
ctcctgcgacaacttatggaacgcgccgggagccctttggcctcgaaaccctccacgcca
gccactcctccacggtttgagattactctctgcaaccaccatggcgtgtcatccattcgc
attaccaaccatggaaacatttgccaatcctttgcagggatgccaaccgagttagccgtg
ctgctgcgggccacacaggatcccgcatggtccgtccaggaagggttacgggatttcctg
aaacatcacggccagcatcatgccttgttttacgaggatgcggacggacgatttccattg
gaatgggcaccggatgcgctgtataccaccaagaccgaactggacattctcgggtcacat
gtttcgattgccgcgtgttgtttacgctacggagaggtgcaaccgaactcatacgcctgt
ctgggatttgcggcggatttgaatgccaaaaagcttgggccactcgaacatgaaggtgga
tgggccgtctacgatctgctatatgagaacagtcaacgggaacaggtcattgaacccgcg
gacccgcttagccgaccgttggccctgccagcgacaccccaacatcgcgagggtcggctt
tcgtcggaacgtcccactggaatggcaagacccacgttttccattccggtcgaacaattt
atcaccttacaactggatatcccccttcatgaacaagaccggatcctgcggtcggtgttg
ctcaagtgtgccgggcaggaggttgcactcactgatcatggccattccggaaaggcaccg
acctaccagtaccgcctcacgttcatcccggaggccattccattagatgcctcggtattg
gatttgaggacaggggtcctccgcgcggaatgttgggtcggggacagtcaggggagaccc
agtgtgcctattttccggatattcccatttcttgaacgagccaaaaccgtctcgaacgga
ttgaaggcgaaaaaacgccgtgcactcctctataacacctttttccaattgatcggtcat
cagaagccaacggatgccaggaaactgataaaggcctgcattgcccaggatgaattccgt
ccattcaaactgaaggctgaggccgaacagatccttcagcgattttcctcccccgcacta
gagcccagtgtgcggctggtggtccacgacgggcactggtgtgtggtgatgaacgattgg
gcgaaagaagccttgctctatgccattccgtatacgctgtggggaccttcgctttttgag
ggaatggtggagcatgatgaaatgagtctgccgctttccaacctctatcccctgcttccc
gagcttcatgcaaaattgcatgaagtcggcatcgggttcttctatcaagaccaacccatt
accacgtcgcagtgggattgctcgatcgatgcgcgacgggcgtcaagcattgattggttt
gaacttcgaccggaattgttgtgtgacggggtgcgaatcgaagcgaaagatatcgaaaaa
attcttgaacgtggtggaatgatggaggaggacggcatcatccggattgtggaccagaac
acccaggccattttgcgcgcgtttgccttcctctccaataagcccaatatggaacaccgg
gaacaaaaagctgtcgtgcgtgtcccgaaactgcaaattctggattgggtggccttgaga
aaacggggagtgaccgtcattctccctccggcggatgaagccttgatcaaccggttgctg
cattttgagcagattgagcctattccccttcctcaagtcgtggatgcgacggtccgtccg
tatcaacaagaggggtatcgatggctggggtttctctatcaacatcgcctgggtgcgtgc
ctggccgatgacatgggattggggaagacgctgcaagccatttgtttattcgccgggatt
aaagaaggcctcatcacagcaccggaaccgattcaaggcccacacctcgtggtgcttcct
cccagcctcttatttaattgggagcatgaaatttccagattttatccctcactgactata
cagtcgtataccgggaaggaacgcacgtcttcatttgcgggagccgatgtggtcctcacg
acctacggcctgatccgacgggacattgccatcctcgaaaagatcccattcaatgtcatt
ctgttcgatgaagcccaggcggtcaaaaacattgtcgccagaaccaccggtgccgcaagg
cgtctcaagggatattttaaatgcgtgatgaccggaacacctttggaaaatcatgtgggg
gaatattacgccctgatggatttgtgcgtgccgggtctgctaggagactatgaagagatc
agggggaaaatgaaagccccttcaccggcgttgttagagaccatcatgcagcggagcaga
ccgtttgtgttgcgccggaccaaaagtcaaatcctcaaagaactgccaccgaaaattgaa
acggatctgtatctggaattgacagatcgccaaaagaatttatatcagcagacggtcacc
aaaattcgttcgaccattgcggccgcctatcgaagtcaaacacccgcgcaggcccggatc
atcgcgctgacggcgattctcaaactccgacagatctgcttgtcaccgcaattgctcggt
cccgggcatacggaactttccccgaaacttgaatgtctccttgatcgcctcaaggaactt
ctggatgaagggcatagtgcgctggtcttctcccaatttacgtcgtttctggatatcgtc
gaacaggccttcgatgcgcatgagattcctcatgttcgattggatggctccacaccgacg
cccacccgaaaaaaactggttcagaaattccaggagggcgcgagcccgtctatcttttta
ttgagtcttaaagccggcgggcaagggctgaatctcaccaaagcgtcttatgtctttcac
ctcgacccctggtggaatcccgctgtggaaaaccaagcgtctgaccgcgcgcatcgcatc
ggacaaacccagaaggtgtctatcatgcggttactcatgcgacataccatcgaagagaaa
atgatggaattgaagcagaagaaattggatctttatcacgccgtcctggaaggggccacc
cctcatggcggcggagcgtctctctcacaaaaagattttgattttcttttggaatga
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