Candidatus Nitrospira neomarina: PQG83_08885
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Entry
PQG83_08885 CDS
T09428
Name
(GenBank) DUF4347 domain-containing protein
Organism
nneo
Candidatus Nitrospira neomarina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
Beta_helix
Cadherin
Big_9
Cadherin_4
NosD
Motif
Other DBs
NCBI-ProteinID:
WNM63854
UniProt:
A0AA96K4Z0
LinkDB
All DBs
Position
complement(2003367..2010431)
Genome browser
AA seq
2354 aa
AA seq
DB search
MKSMHCKPATLQAGKDPKVVKPGAKKKRKPTPPQEPDTARLTGTCIALEPRILFDGAALA
TGAEVVQDTTTQDQPGVPEVNGETSTDSNTHDTSDNDALWSSGLSLSTSSDRKEIVFIDT
RVENYQTLMDGIDPAAEVILLDARRDGIEQIAEALKDRSDIDAIHLIGEGTEAEMHLGTA
FLTNDSISNHYAALLSQIGQSLSADADLLIYGCNFGRGAGGLSAIQALADLTRADIAAST
DRTGHVSEYANWQLEISTGFIESSIVIGQATQDVWEGVLATYTVTNTNDSGAGSFRQAIL
DANANAGSDTINFSIAGAGPHVITLTGSELDPITGPVLIDGWSEPDFAGTPVIRIDGSSL
GGPSRDGLSFTGTSDGSTVRGLMITGFSRDGILIQSGADNITVVGNWIGTTGTGSTGVGN
GDDGIEIAGSNAIIGGTGANDRNVITNSGDEGITIVGSGVTGHLIQGNYIGLDPDGSTGG
GNTDVGIAIITGSGNTIGGTTAAARNVISKNFEGIEINTNNNIVQGNYIGTDAGGTLNRG
NRSDDGVEVQGSATGNLIGGTAAGAGNLIAFNALDGVNIVNGSSNAVLGNRIHSNSNLGI
DLGTSGVTANDAGDPDTGANNLQNFPVLTSANSNTSGTTIVGTLNTNASLAYRIEFFANR
PSVADASNGEGERYLGFTTVTTDGSGNASFNVTLNSVWINAGDRVTATATRDLGGGNYGD
TSEFAANATATSTGIVVVDTTSDVSDGTTTSITNLGNARGADGRISLREAVAATNATGGT
DTIVFNIPAALTGGAHTIIVSSALPSITEAVIIDGTTEPDFGTTPIIEIDGTSAGAGSNG
LVISGTGGGSTLRGLVIQNFVQNGILLQGGNNLIAGNYIGLDADGTTTRGNNTSGTGIQG
GIRIESANNTIGGLVAADRNVISGNIFSGIALAGAGATGNQIRGNYIGTDAGGTLDRGNT
QEGIEIDNADGNTIGGSAAGAQNVISGNDSDGIEIDNGDNNIIQGNYIGTDYTGTLDLGN
SRDGIDLNEDTGDGATGNLIGGTGANEGNLIFGNDLHGIEVRDAPTTGNAILGNRIYGNT
LRGINLEGGTEDGFGVTANDAGDGDAGANDLQNFPVLTTADVDSPTQVTIDGTFNSTASS
TFRIEFYKNTIATGQDPSSHGEGQTYLGFTSVTTDGSGNGTFNTTLTASVTAGEFVTATA
TRDLGGGNYGSTSEFALNATATAVNDIPVIANLGGDTLAYTEGDGAQVIDQSGNAAVSDV
DSADFDTGTLTVSFQAGSDAAEDVLAIRDQGAGPTNITVAGSAVSYGGTQIGTFTGGSGG
TDLVITLDANADSAAVSALVQNITYENTDTDNPTLGSRTVRYVLTDGDGGTSANYDTTVT
ISSQNDAPVLTPASPTLTTITEDDTTNSGDLVSTIVGASITDVDSGAVEGIAITGLTSGN
GTWEYDIGGGWTAVGAVSDVSALLLRSTDSLRFVPDGQNADSATVTYRAWDQTSGTEGTK
VDASTNGGTTAFSTATDTASITVTAVNDAPVLTPASPTLTTITEDDTSNSGDLVSAIVGS
SIADVDSGAVEGIAITGLTSGNGTWEYDIGSGWTAVGAVSDATALLLRSTDSLRFVPDGL
NADSATVTYRAWDQTSGTEGTKVDASTNGGTTAFSTATDTATITVTAVNDAPAIITNGGG
PTAALTRSENITAVTTVTATDVDVPADTLQYSIIGGADMALFSIGSGTGVLVFNAAPDFE
APGDADTDNVYEVTVQVSDGNGGFDTQAISVTVVDNVGTLTVDTTSDTADGDTSSIAALL
ADKGFDGFISLREAIIATNNTGNDGAADQINFNIAGAGPHTISPSSALTTLTDVVVIDGY
TQAGSSANTLATGNDGVLQIELNGTGAGSANGLTLGSGSAGSTIKGLIINRFSLSGIQLS
GANNVVVGNWIGLDNTGAVDQGNAIDGITITANNNTIGSAAAADRNVISGNNDEGVDVDP
GISGTVIQGNYIGTNISGTAAVGNGQVGVGPWGGIIVDGSNNTIGGSNTGEGNLISGNNQ
WGVWIIGTGNRVLGNKIGTDAAGTVALGNVGDGIQIATSSNKVGGVNAGEGNLIAHNTNN
GVNVTGGTNNSILGNQIHSNTGLGIELGSTGVTVNDAGDADAGANDLQNFPVLATADVDS
PTQVTIDGTFNSTASSSFRVEFFKNTTATGEDPSGHGEGQTYLGFTSVTTDGSGNGSFNL
TLNASVTTGEFVTATATEDLGGGNYGSTSEFSLNTTAVAENDAPVLTPSSPTLTTITEDD
TSNSGHLVSAIVGASITDVDTGAVEGIAITALTSGNGTWEYDIGGGWTAVGAVSDDDGLL
DGDGYGDDHGDGGQ
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatgcactgcaagcccgcgacgctccaggccgggaaggaccctaaggtggtg
aaacctggcgcgaagaagaagcggaagcccaccccaccccaagaaccggatacagccaga
ttgaccggaacctgtatcgccctggagccacggatcctattcgatggagccgccctcgcc
acgggagcggaagtcgttcaagacaccaccacgcaagatcaaccgggcgttcccgaagtc
aatggtgagacaagtacggattccaacactcacgatacttccgacaatgacgccctctgg
tcctccggtctttccctctccacgtcttcggaccgcaaagagatcgtcttcatcgatacg
cgtgttgaaaattatcagacgcttatggacgggatcgatccggccgcggaagttattctt
ctggatgcgagacgggacgggatcgaacagattgcggaagccctcaaggatcggagcgat
atcgacgccattcatctcatcggggaaggcaccgaggccgagatgcatttgggtacggcc
tttctcacgaacgattcgatcagcaatcactatgcggcgctgctcagtcagattggacag
agtctgtctgccgacgccgatctgttgatctacggctgtaacttcgggcgtggagcaggc
ggcctctcggctatccaggccttagcggatctcacaagagcggatatcgccgccagcacg
gaccgcaccgggcacgtgagcgaatatgccaactggcaactggaaatttccaccggcttc
attgagtcgtccattgtgatcggccaggccacgcaagacgtatgggaaggggtgctggcc
acgtataccgtgaccaataccaatgattccggggcagggtcgttcagacaagccattctc
gatgccaatgccaatgccgggagtgacaccattaatttcagcattgccggtgcgggccca
cacgtcatcactctcactgggagtgagctggatcccattactggcccggtgctcattgat
ggctggagcgaacccgatttcgcgggtacgccggtcattcgaatagacgggtcttcactg
ggggggccgagcagagatggcctctcttttaccgggaccagcgacggcagtacggtccga
ggattgatgatcacgggattttctcgagacgggatccttattcagtcgggtgcggacaat
atcaccgtggttgggaattggatcggtacaaccgggaccggttcgaccggcgtaggaaat
ggagatgatgggattgaaattgctggttccaacgccatcatcggcggtaccggggctaat
gaccgtaacgtcatcaccaacagtggagacgaaggaatcaccatcgtgggttcaggagtc
accggacatctcatccaagggaattacatcggtcttgatcctgacggatcaaccggaggg
ggcaataccgatgtcgggatcgccattataacggggtccggcaatacgattggcggcacc
acagcggctgccagaaatgtcatttcaaaaaatttcgaagggatcgaaatcaacacgaat
aataacattgtgcagggaaactacatcgggacggatgcgggcggcacgttgaaccgaggg
aatcgctcagacgatggagtggaagtccagggcagtgcgaccggcaacctgatcggcggg
acggcagcaggagccggcaacctcatcgccttcaacgcattggatggggtgaatatcgtt
aacggaagtagtaatgcggtacttgggaatcgaattcattcaaacagtaacttgggcatt
gacctgggtacgagcggagtcaccgctaacgatgcgggtgatccggacaccggcgccaac
aacttgcaaaattttcccgtgctcacttctgccaactctaatacgagcggcacgacgatt
gtcggtacactcaacaccaatgccagtctcgcctatcgtatcgaattttttgccaatcgc
ccttccgttgcggacgcctctaatggtgaaggtgagcgctacctgggcttcacgaccgtc
acgactgatggatccggtaatgcgagcttcaacgtaaccctgaatagcgtctggataaac
gcgggtgatcgcgtcacggcaacggccacgcgtgatctcggcggcggcaactacggcgat
acctcggagttcgcggccaacgccaccgcaacctctaccggcatagtggtcgtcgatacg
acgagcgatgtcagcgacggcacgacgacgagcatcactaatctgggtaacgcgcgtggc
gccgacggccgcatctcattaagggaggccgttgcggcaaccaatgcgacaggcgggacc
gatactattgtgttcaatatacccgctgcgctgacggggggtgcccatacgattatcgtc
agctcggctctgccatcaatcacggaggccgtcatcatcgatggcaccaccgagccggat
tttgggaccacacccatcattgagatagacggcaccagcgcaggtgccgggtcaaacgga
ttagtgatcagtgggactgggggcggttcgactctccgtgggctggtcattcaaaatttt
gttcagaacggcatcctcctccaaggggggaataacctgattgcgggaaattacattggc
ctcgacgccgacggcacgacgacgaggggaaataatacgtccggcacgggtattcaaggc
ggtattcgaattgaatcagccaataataccatcggtggtcttgttgccgctgatcgcaat
gtaatatccggaaacatattcagcggaattgcgcttgccggtgccggtgccacaggaaat
caaatccggggaaactatatcgggaccgacgccggaggaacccttgatcgtgggaatacg
caggaagggattgagatcgacaatgccgacggaaataccattggaggttccgccgccggc
gcacaaaatgtgatctcaggcaatgacagcgatgggatcgaaatcgacaacggcgacaac
aacatcattcaaggaaactatatcgggacggactatacgggcacactcgaccttgggaac
agccgtgatggcatcgatctcaatgaagatacgggagacggggctactggcaatcttatt
ggtgggacaggtgcgaacgaagggaacttgattttcggaaacgacctgcatgggattgag
gtacgcgatgctcctactactggaaatgcgatcctggggaaccggatttatggaaacact
ctccggggaattaatctcgagggaggcacagaagacggtttcggcgtaaccgccaatgac
gcaggggacggagatgccggcgctaacgacctacagaattttccggtgctcacgacggct
gatgtggactcacccacgcaggtcaccattgacggaacattcaatagtacagctagtagc
acctttcggatcgaattttataaaaacaccattgctaccgggcaagatccttccagtcac
ggagaaggacaaacctatctcggctttacgagcgtcacgacagacggaagtggaaacggg
acgttcaacaccacccttacagcttcggttaccgccggtgagtttgtgaccgctactgcc
acgagagatcttggcggcggcaactatggttcaacctccgaattcgcgcttaacgcgaca
gccaccgcggtcaatgacatcccggtcattgccaacctggggggcgacacgttggcctac
accgaaggcgacggcgcgcaagtcatcgaccagagtggcaatgcggcggtgagtgatgtg
gactcggcggactttgacacggggacgttgacggtctccttccaagcgggcagtgatgcg
gccgaggatgtcttggccatccgcgatcagggggcgggccccaccaatatcaccgtggcg
ggcagtgcggtcagttatggcggcacgcaaatcggcacctttacggggggcagtggcggg
accgacctggtcatcacgctcgatgccaatgccgattcggcggcggtgagtgcgttggtg
cagaacatcacctatgagaacacggacacggacaacccgaccttgggcagccgcacggtg
cgctatgtgctgaccgatggggacgggggcaccagtgccaactacgacacgacggtgacg
atcagcagccaaaacgatgcgccggtgttgacgccggccagccccacgctcaccaccatc
acggaagatgacacgacgaacagcggcgacctggtgtcgaccatcgtcggcgcttcgatc
accgatgtggattcgggggcggtggaggggatcgcgattacgggcctcacgagcggcaac
gggacgtgggaatatgacatcgggggcgggtggacagcggtgggcgcggtcagtgatgtc
tcagcgttgctgctgcgcagcaccgatagcttacggtttgtgccggacgggcagaatgcg
gacagtgcgacggtgacctaccgggcctgggatcagacgagcgggacggaagggacgaag
gtggatgcgagtacgaacgggggcacgacggccttctcgaccgcgacggatacggccagc
atcacggtgacggcggtcaatgacgcgccggtgttgacgccggcgagtcccacgctcacc
accatcaccgaagatgacacgagcaacagcggcgacctggtgtcggccatcgtgggcagc
tcgattgccgatgtggacagtggggcggtggaaggcatcgccatcacgggcctcaccagt
ggcaacggcacgtgggagtatgacatcggaagcggctggacggcggtgggggcggtcagt
gatgcgacggcgctcttgctccgtagtaccgatagcttacggtttgtgccggatgggttg
aatgcggacagtgcgacggtcacctatcgggcgtgggatcagacgagcgggacggaaggg
acgaaggtggacgcgtcgaccaacggcgggacgacggccttctcgacggcgacggatacg
gcgacgatcacggtgacggcggtcaacgatgccccggctatcatcactaacggagggggg
cccactgccgcccttacccggagtgaaaatattactgctgtgacgacagtgacggccaca
gatgtagatgtgccggcagacacgctgcaatatagcatcattggtggagcggacatggct
ctgttttctatcgggagtggcactggcgtccttgtctttaatgccgctccggacttcgag
gcgcccggggatgccgacacggacaatgtgtatgaagtgaccgtgcaggtcagtgacggg
aacggtggattcgacacgcaagccatctccgttaccgtggtcgataacgtcggcactttg
acagtcgatacgacctccgatacggccgatggggatacctcctcgatcgcagccttgctg
gcggataaggggtttgatgggtttatttctcttcgagaagccattattgccaccaacaac
acgggtaatgatggggcggcggatcaaatcaatttcaacattgcgggggccggcccgcat
acgatcagtccgtcttcagctttaaccacccttaccgatgtcgtggtgattgacgggtac
acgcaggctggttcatcggccaatacgcttgcgactggaaatgatggtgtcttgcaaatc
gaactgaatggcactggtgcgggtagtgcaaacggactgactcttggctcggggagcgcc
ggcagtacgatcaagggtttgattatcaatcgcttcagcctcagcggtattcaactcagt
ggtgccaacaatgttgtggtgggcaactggatcggtttggataataccggggcggttgac
caggggaacgccatagatggtattacgatcaccgcgaataataataccattggcagtgcc
gccgctgcagaccgcaacgtgatctccgggaataatgacgagggtgtggatgttgatcct
ggcatttccgggacagtcatccaaggaaactatattggcaccaatatttcaggcactgcg
gctgtcggcaatggacaggtcggtgtggggccctggggaggaattattgtagacgggagt
aacaacacgattggaggctcaaatacgggggaggggaacctcatttccggcaataatcaa
tggggtgtgtggatcatcgggacgggaaatcgcgtgctgggtaacaaaatcggcaccgat
gccgcgggaactgttgccttgggaaatgtcggcgatggtattcagatcgccacctcgagt
aacaaggtgggtggggtgaatgccggcgaaggcaatctcatcgcacacaacaccaataat
ggtgtgaatgtcaccggagggacgaacaatagtattcttggtaaccagattcattcaaat
accggtttgggcattgagttaggaagtaccggagttactgtcaacgacgcgggtgatgcc
gatgcgggtgccaacgacctgcagaattttcctgtgctggctaccgccgatgtggattcg
ccgacccaggtcactatagacgggaccttcaatagtacggccagttcctcgttccgggtt
gagtttttcaagaataccactgcgaccggcgaagatccttccggtcacggagaaggccaa
acctatcttggttttacgagcgtcacgacggatggcagcggcaatgggagttttaatctc
actttgaacgcttcggtaacaacaggtgagtttgtgacggccaccgccacagaagatttg
ggaggcggtaactatggttcaacctcggaattttcgcttaacacgactgcggttgcggaa
aacgatgccccggtgctgacaccgtcgagtcccacgctcacgaccatcacggaggatgac
acgagcaatagcggccatttggtgtcggcgatcgtcggcgcgagtatcacggatgtggac
acaggggcggtggagggcatcgccatcaccgccctcacgagtggcaacggcacgtgggag
tacgacatcgggggtgggtggacggcggtgggggcggtcagtgatgacgacggccttctc
gacggcgacggatacggcgacgatcacggtgacggcggtcaatga
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