Candidatus Nitrospira neomarina: PQG83_08935
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Entry
PQG83_08935 CDS
T09428
Name
(GenBank) DUF4347 domain-containing protein
Organism
nneo
Candidatus Nitrospira neomarina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
Cadherin_3
Cadherin_4
Big_9
Cadherin
Motif
Other DBs
NCBI-ProteinID:
WNM63864
UniProt:
A0AA96GK00
LinkDB
All DBs
Position
2031614..2037988
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AA seq
2124 aa
AA seq
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MKTLLALEPRILFDGAALSTGAEVAQDQTAHNQTMAGTDGHADTDSDALMATDHEADWAE
SFSLAAPTQSGRREIVFIDTRVEDYQTLMNGIHPGAEVVLLDAGRDGLEQIAEVLKDRSA
VDAIHLIGEGTEAELHLGTAFLTNDSINNHYAALLSQIGQSLSADADLLIYGCTFGRGQA
GFSAIQTLAELTGADIAASTDRTGHVSEYANWELEVATGFIETSIVIGEATQEAWEGVLA
TFTVTNTNDSGGGSLRQAIIDANAAPGTDTIIIPTGTYVLTSGKLVIDDDVIITGAGAAT
TIIDGNANERVFETTGSTTTTMSGVTIQNGRASGNGAGVYVNNSSILNLSDARLTNNDGT
GGDGGAFHVHGTLNLNRVLIDNNQANNGAGIYFHGADGGTLTNVTISGNTASNEGGGIWT
DIPITIMNSTIAFNTAPVGGGVYDKDGMEITITNSILHNPGSPNSFGTLISGGNNIDSDG
TAVLGDPLDGQDPMLGGLADNGGPTWTHALLAGSPALNAGTTSGAPAVDQRGLTRDAAPD
IGAYEFKSSAFVSKNEFMVNAPSGDNEMTSGPLRGAERAVDIASNGDYVVVWTNGTSNDK
VYAKVLDASGNQKVAQFQVNIGGGTNNWTDVAVDDSGNFVVIWTQGNDVFMRRFLANGTA
VDAGDVLVNTGTANTQQNPSVNMNGTGDFVIAWEGDGGANEGIFVRQGSFGGGLVGSDIT
VNTAAAAKDPSVGIDDSGNFVVVWDNGSDVFFQLYNSAGVPQNSGQVDIVLHSNAGGAAV
EMSGDGRFTVAYRATVLNVDVYVRQFDAAGNPLFLPQLANTSILGTQTSPSIAMDDIGEF
IVVWEGAGNQLGQNDTAGVFGQKFNASGQKVGFEFLVNQTTANTQDRASVAMLDRDNFVA
VWTGSDGAQTDIFARQYGSTAAPTLDLDVNNSSGASDNDYAFTFTEGDGPTAIADADTDL
ADVDSTTFAYVTLSVSGLLDGDAEVLILDGDTFALATDAPGQDTTGGNYHVRVSTAAGTA
IMTIVKQSGATFSEVEAETLIKAIQYQHTDTDAPTDGDRLIEVRVNDGTTDSAAARTTIN
MNPVNDPPVLVTNNPLNVPEESTQTITSAYLAATDVDNTPSQLVYTLTQLPGGTGQVRLS
GSGLGLGGTFTQDDIDNNRVTFRFTDDDEATATTFNVTLSDGTFTSSDITFSINGQPVND
PPAFSGLDNTPTYTEDGAAVVLDNNATIADPELDAANNYNGATLTLARNGGANAEDVFAN
SGTLNTLTESGSLVVSGTTIGTVTTNSGGTLVLTFNNNATTVLVNSALQQITYSNSSDTP
PANVQIDFTVNDANTGGQGTGGARSDTGSITVIINPTNDLPSIDLDANDSSGATINDYAV
TFPEGASPIGIADVDTDLVDPDSSTFAYVKLAVSGLLNGNAETFVIDGDTFTLAAAVAGQ
DTSGGNYHVIMTTGAGTATMTITKQGGGTFTEIETETLIKSIQYQHTDSNSPTDGDRLID
VIVNDGTADSTASRTTINVNPVNDLPAFSGLDNTPTFIEGGVAVVLDGNAAIADPELDAA
NNYNGATLTLTRNGGARADDVFNGSGTLLPLVESGNLMVGATTIGTVTTNSGGTLVLTFN
SNATTALVNSALQQITYANNSSNPPANVQIDYTFSDGNTGAQGTGGALNDLGSITVNITT
VNNPPIALPDSFLVNEGSTTTLNLSNNDLDIDDGLDLSSITIISGPTNGTITSINPDGTV
NYTHNGSETLSDSFTYTIRDLSGATSNTIRVDLTVTPVNDAPVITSDGGSATANISVTTG
STAVTDVDATDAESNLLTYSIIGGADAALFTIDPATGVLTFITAPDFQAPGDVGADNIYD
VIVQASDGTSVDTQAIAVTVTEANVPPQIFVPPPSDPPPSSDPPPRDAGEETLEDQAPGN
GGSLDYGSPGNIPDGDQGSTITGAKNSVSENPLGRHESPDKQEDGERTGLVGIVSDLWSV
LRKPLDITAFKDEIRSLLHRSGFLQDLDRVRDDVQEVAATEQTYLASSIAVSTGLSIGYV
VWLLRSGVLLTALLSSVPAWQFVNPLLVLDAAGKKKRQEGQKGVDGDSVESLFEKPTVSA
ETGKEKTVAPAKTLRARWFNWNKG
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactattggctctcgaaccaagaattctctttgatggagccgccctttccacg
ggagcagaagtggctcaagatcagactgctcacaatcaaactatggcgggtaccgatggt
catgcagataccgattccgatgccctcatggccactgaccatgaagccgattgggccgag
agcttctcacttgccgcccccactcaatccggtcgtcgggaaattgtcttcatcgatacg
cgggttgaggattaccagaccctcatgaacggtatccatcctggcgcagaagttgttctt
ctggatgcggggcgggacggacttgaacaaattgccgaggtgctcaaggatcgaagtgct
gtggatgccattcatctcattggagaaggcaccgaagcggaactgcatttaggcacggcc
tttctcaccaatgattcgatcaacaatcactatgcggcgctgttgagtcagatcgggcag
agtttgtctgccgacgccgatctcttgatctatggctgtacctttggacgcggtcaggcc
ggcttctctgcgatccaaaccctagccgaactgacaggggctgatattgccgccagcacg
gaccggaccgggcacgtcagcgaatatgccaactgggaattggaagtggcaacgggtttc
attgaaacgtcgatcgtcatcggcgaagccacccaagaagcctgggagggtgtcctcgcg
acctttaccgtcaccaataccaatgactctggagggggttcactgcggcaggccatcatc
gacgccaatgccgcgcccggaaccgacacgattatcattccgacaggaacctacgtattg
acctcgggaaaacttgtcattgatgacgatgtaatcatcaccggagccggcgccgcaaca
accatcattgatggcaacgcaaatgaacgagtgtttgagaccacaggaagcactacgacc
accatgagcggggtcacgattcaaaacggccgggcgagcgggaatggggccggtgtgtat
gtgaataactcgagcattctgaatttgagcgacgccaggttgacgaacaacgatggcacg
ggtggcgacggcggggctttccacgtacatggcacgctgaaccttaaccgggtcctcatt
gacaataaccaggcaaataacggcgccggaatctactttcacggggccgatggaggcacc
ctgacgaatgtcacgatcagcggcaacaccgcaagcaacgaagggggtgggatctggacg
gacattccgatcacgattatgaattccaccatcgcgttcaatacggcacctgttgggggt
ggcgtgtatgacaaggatggcatggaaatcacgatcacgaattccattctccataatcca
ggatcacccaacagctttggcacgttaatctcgggtgggaacaacatcgatagcgacggc
acggcggtattaggagatccgttggatggccaggaccctatgctgggcggtttggcggac
aacggggggccgacctggacccatgcgctcttggcgggcagccctgccctcaacgcgggc
acgacatccggtgctcccgccgtcgatcaacggggattgacccgtgatgccgcaccggac
atcggcgcgtatgaatttaagtcttccgcctttgtctccaagaatgaattcatggtcaac
gctccttccggagacaacgaaatgaccagcgggcccctacgcggggccgagcgcgccgtc
gatatcgcctcgaatggcgactatgtggtggtgtggacgaacggcacctccaacgacaaa
gtatatgccaaagtcttagacgccagcggcaaccagaaggtcgcacaatttcaagtcaac
attggtggtgggaccaacaattggacagatgtggccgtagacgatagcgggaatttcgtc
gtcatctggactcaagggaacgatgtgttcatgcgtcgcttcctggccaatggcaccgcc
gttgacgccggagacgtattggtcaacaccggcactgccaacactcaacaaaacccgtcc
gtgaacatgaacggcaccggagatttcgtcatcgcctgggaaggtgatggcggggccaac
gaaggcatcttcgtgcgacagggcagctttggcggagggttagtcggcagtgacatcacc
gtgaacactgcggctgcggccaaggatccatcggtaggtattgacgattcgggaaacttc
gtcgtcgtctgggataacggatcggatgtgttctttcagctctacaacagcgcgggtgtt
ccacaaaatagcggtcaggttgacatcgtacttcattcaaatgccggaggtgctgcggtc
gaaatgagcggcgatggccggttcacggtagcctatcgggccacggtcttgaatgtcgat
gtgtatgtccggcagttcgatgccgccggaaaccctcttttcctccctcaactcgccaat
acgtccatccttggcacgcagaccagcccctcgatcgccatggatgatatcggtgaattc
atcgtcgtgtgggaaggagccggcaaccagcttgggcagaatgacacggccggggtcttc
ggccagaagttcaacgccagcggccaaaaagtcggcttcgaatttttggtcaatcaaacc
accgccaacactcaggaccgtgcctcggtggccatgctggaccgggataacttcgtggcc
gtgtggaccggcagcgacggcgcacaaactgatatctttgcgcgccaatacgggagtaca
gccgccccaacgttggaccttgatgtgaataacagcagtggagcttcggacaatgattat
gctttcacttttaccgaaggtgacggacccaccgcaattgccgacgccgataccgatctg
gcggatgtggacagcaccacgtttgcgtatgtgaccttgtcagtcagtggcctcctggat
ggcgatgcggaagtcctgatcctcgacggggatacctttgcgctggccaccgatgcgccc
ggtcaggacaccaccggcggcaactaccatgtgcgtgtgtccacggcagccggcacggcc
atcatgacgatcgtcaaacagagcggggccacctttagtgaagtcgaagcggaaacgctc
atcaaggcgattcaataccagcatacggatacggacgcacctactgatggtgaccggctg
atcgaggtaagggtgaacgatggcaccacggacagtgcggcagcccgcacgaccatcaac
atgaatccagtcaatgacccgccggtgctggtcaccaacaatcccctgaatgttccggag
gaatccacccaaacaattaccagcgcctatctggcagccacggatgtggacaacaccccg
agtcaactcgtctatacgctgacacaattgcccggcggaactggtcaggtgcggttgagc
gggagtggcctcggactgggagggactttcacacaggacgatatcgataataatcgcgtc
accttcaggttcaccgatgatgacgaagccactgcgaccaccttcaacgtgacgctgagt
gacgggacatttacctcatcagacatcacgttttcgatcaacggacaaccagttaacgac
ccaccggcctttagtggactggacaatacacccacctataccgaagacggggctgccgtg
gtgctggataacaatgcgaccattgccgatcctgaattggatgcggccaataattataac
ggagccacactcacgttggcccgtaacggcggcgccaatgccgaggatgtgtttgctaac
agcggtactctcaataccctgacggaaagcggcagtttggtggtgagcggcacgactatc
ggcaccgtcaccactaatagtggcggcacgctggtattaacgtttaataataatgcgacg
acagtcttggtcaacagtgcattgcagcagatcacttattccaacagcagcgatactcct
cccgccaatgtccagatcgactttacggtcaacgacgccaatacaggcggacaaggtacc
ggcggtgcccggagcgatacaggctccattaccgtcatcattaatcctaccaatgatctt
ccgtcaattgacctggatgccaacgacagttccggcgccacaatcaacgactatgcggtc
acctttcctgaaggcgccagcccgatcggcatcgccgacgtcgacaccgatctggtggac
ccggacagcagcaccttcgcatatgtgaaactggccgtcagcggcctgttgaacggtaat
gccgagactttcgtcatcgacggggatacctttaccttggccgccgccgtagccggccag
gatacctccgggggaaattaccacgtcatcatgacgaccggcgccggcacggccaccatg
accatcaccaaacagggtgggggcaccttcacggaaatcgagacagagacgctcatcaaa
tccattcagtatcagcatacggattcaaattcgccaactgatggcgaccgtctgatcgat
gtgatcgtcaacgatgggacagcagacagcactgcctcccgtacgacgatcaacgtcaat
cccgtcaacgatctccccgcatttagtggcctggacaatacgcccacctttatcgaaggc
ggtgtggccgttgtgcttgatggcaacgctgcgatcgccgatccggagctggatgcggcc
aataactacaacggggccacgctcactctgacccgcaatggcggcgcacgcgccgatgac
gtattcaacggcagcggcacgctccttcctcttgtggagagcggcaacctgatggtgggc
gccacgacaatcggcaccgtcaccaccaacagcggtggcacactggtgctcaccttcaac
agcaacgccacaaccgccttggtcaatagtgcgttgcagcaaatcacctatgccaataac
agcagtaatccaccggctaacgtacagatcgattacaccttctctgatggtaatacgggt
gcccaaggcaccggtggcgcgctcaacgatctcggatccatcaccgtgaacatcactacc
gttaataatcctcccatcgccttgcctgacagctttctggtgaacgaaggttcgactacc
actctgaacctctccaacaacgatctggatattgatgacgggctggatttgtctagcatt
actattatctcaggtcccaccaatggcaccatcacaagcattaatcccgatgggacggta
aattatacccataatggctccgaaaccctctctgacagtttcacctatacgatccgggat
ctctccggtgccacatcaaataccatcagggtggacctgaccgtaaccccggttaacgat
gcccccgtcatcacctcagatggaggcagtgccaccgccaatatttccgttaccaccggc
agcacggcggtgactgatgtcgatgccacagatgcagagagcaacctcctgacctacagc
ataatcgggggtgccgatgcggcgttatttaccatcgatcccgcgaccggggtcctgaca
ttcatcaccgctccggatttccaggcgcctggcgatgtcggggccgataacatctatgac
gtgatcgtccaggcctccgatggcacgtccgtcgatacacaggccatcgccgtcacggtt
accgaagccaatgttccgccacaaatttttgtccccccgccatcggaccctccgccttca
tcggatccccccccaagagatgccggcgaagagactttagaggaccaggcgcctggcaac
gggggcagtcttgattacggctcgccagggaatatccctgacggcgaccagggctccaca
atcactggcgccaaaaattcggtgtcggaaaatcccctgggacgacacgaatcgcccgat
aagcaagaggatggagaacgcacgggcctcgtgggcatagtgagtgacttgtggagtgtg
ctcaggaagccccttgatatcacagccttcaaggatgaaatccggtccttgctgcacaga
tcaggattccttcaggacctggatcgggttcgcgacgatgttcaggaggttgccgccacc
gaacaaacctatttggcctccagcattgcggtctcaaccgggttgtccatcggctatgtc
gtctggctcctgcgcagtggggtgctattaacggccctgctttcgtccgtgccggcctgg
cagtttgtgaaccccctgttggtgctggatgcggcggggaagaagaaacgacaagaggga
cagaagggcgtggacggcgattcagtagagtccctatttgagaaacccaccgtatctgcc
gagacaggtaaggagaaaaccgtggcccccgctaagacccttcgagcccggtggttcaat
tggaataagggatga
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