Candidatus Nitrospira neomarina: PQG83_10215
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Entry
PQG83_10215 CDS
T09428
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
nneo
Candidatus Nitrospira neomarina
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
Sigma54_activ_2
GAF_3
Mg_chelatase
AAA_5
HTH_8
AAA_2
AAA_16
AAA_19
AAA
AAA_7
bpMoxR
MCM
AAA_3
DUF4795
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WNM64105
UniProt:
A0AA96GPB0
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All DBs
Position
complement(2347783..2349837)
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AA seq
684 aa
AA seq
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MDKRTQPVLGDQSSRYQALLEVSEAIAVHRDLTNLIQDLAQRLPRIVPLNFIGLALHRPE
RNTIQDYIIQANIPADIQGGKEWALDTHPSGWVWQAQQPLIISDLTQDSRFPMVLPLMLE
DGVQSLCTVPLTTALRRLGSLDFASVEKDTYQESELTFLLQVANQVAVAVDNVLHQEELS
RERDRLQVLLDVNNAIVSKLELGVLFSTMVTSLRRVIPHEATSLYFYNPDAKNFHRQVLN
FPSGKGLLGGSHSIALDDTPAGEAFRSRKTVCWQEADLQQFHSVTARQLIAEGVKFGCCV
PLMLPDRVLGTLNVGSTRPSAFSTADADLLTQVAGQVAIALENALVYREITELKEKLEKE
NVYLRDEIRTEANFEEIVGESTGLKRVLQQLEIVAPTDSTVLILGETGTGKELIARALHQ
LSTRNDQAFVKINCAAIPTGLLESELFGHEKGAFTGAISQKVGRFELAHRGTIFLDEIGE
VPLELQSKLLRVLQEQEFERLGGTRTIRVDVRLSAATNRDLMQMVEAGEFRRDLYYRLNV
FPITIPPLRDRQEDIPILVRYFTQRYATRMKKPIETIPTRTMERLAGYPWPGNIRELENL
IERAVILSQGSELAVPLLDLKAAVQRSPQPITTLEGAERDHILRALQDTKWVIGGAGGTA
ARLGMKRTTLISKMKKLGISRPTH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcactcagcctgttttaggagatcaatcgtcgcgctatcaagccctgctc
gaggtctccgaggcgatcgcggttcaccgggacctcaccaacctgatacaagacctggct
cagcgccttccccgtatcgttcccctgaatttcatcgggctggctctccatcggcccgag
cgaaacactatccaggattatattattcaggccaatattcctgcggatattcagggcggg
aaggagtgggcgttggatacccatccgagtggctgggtgtggcaagcccaacagccgtta
attatttccgacctgactcaggattcccggttccccatggtcctcccactcatgctcgaa
gacggcgtgcagtcgttatgcacggtcccgctgaccaccgccttgcgtcgtctgggatca
ctcgacttcgcgagtgttgaaaaggacacctaccaagagtcggaattgacgtttctgctg
caggtcgccaaccaagtggctgtcgcggtggacaatgtcctgcatcaggaagaactgagc
cgcgagcgggatcgtctgcaggttttgttggacgtgaacaatgcaattgtgtcgaagctg
gaacttggggttttgttttcgaccatggtcacgtccttgcgacgggtgattccgcatgaa
gccaccagcttatatttctataatccggatgcgaagaactttcatcgacaagtgctgaat
ttcccttcagggaaaggcttgttgggaggaagccattctattgcgcttgatgacacgccg
gccggagaagcgtttcgatcacgaaaaacggtgtgttggcaggaagccgatctgcaacaa
tttcattccgttaccgcccgacagttgatcgcggagggtgtgaaattcgggtgctgtgtg
ccactcatgctgcccgatcgggtgttggggacgttgaatgtcggcagcacccgtccttca
gccttttccacggcggatgccgacctgctgacgcaggtcgccggacaagtggcgattgcg
ctcgagaatgcccttgtctatcgggaaattaccgaattaaaagaaaagctggaaaaggag
aatgtctatctccgggatgaaatccggacagaagccaactttgaggagattgtcggcgag
agtacgggcttgaagcgtgtccttcaacaattggaaattgtcgccccgaccgattcgact
gtgctgattctgggtgagacgggcacaggcaaggaactcattgcccgggctctccaccaa
ctcagcacgcgaaacgatcaggccttcgtcaaaattaactgtgcggccattcccacaggt
ctcttggaaagcgaactattcggccacgaaaaaggtgcctttacgggggcgatttcacaa
aaggtcggacgctttgagcttgcccatcgcggcacgatttttttggacgaaatcggggaa
gtgccgttggaactgcaatccaagttgctccgggtgctccaggaacaggaatttgaacga
ctgggtgggacgcgcacgatccgtgtcgatgttcgtctgtcggcggctaccaaccgcgat
ttaatgcagatggtggaagccggcgaatttcgtcgtgacctgtattaccggttgaatgtc
tttcccatcacgattccgcctcttcgcgaccggcaggaggatatcccgattctcgttcgg
tattttactcagcggtatgccaccaggatgaaaaagcccatcgagaccattcctaccagg
acgatggaacgtctggcaggctatccctggcccgggaatattcgtgaactggaaaacctg
attgagcgcgcggttattctttcccaggggtccgagctggctgtaccgttattggacctc
aaagctgccgttcagcggtcgcctcagcccattacaacattagaaggagctgaacgggat
cacatcctccgtgcgctgcaggataccaaatgggtgatcggcggcgctggaggtacggcg
gcacggctggggatgaaacgcaccacattgatctccaaaatgaaaaagcttggaatttcc
cgcccgacgcattga
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