Candidatus Nitrospira neomarina: PQG83_11965
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Entry
PQG83_11965 CDS
T09428
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nneo03016
]
PQG83_11965
Enzymes [BR:
nneo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PQG83_11965
Transfer RNA biogenesis [BR:
nneo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PQG83_11965
Prokaryotic type
PQG83_11965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WNM60478
UniProt:
A0AA96JUC3
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All DBs
Position
2775051..2776058
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AA seq
335 aa
AA seq
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MTPSFSPHLVNHPFGDPGLYVDIRWSRRALLFDLGDNMPLSPTQLLRAQDIFISHTHMDH
FIGFDRLIRVALGRGKHLRLHGPPGLIENIQGKLRGYTWNLVDGYPLTIEAREYHPTHIQ
PAHFHAKNAFACKRESIIPGDHSHVFPVLQEPALLVKAVALNHRIPSLAFSLEEPFHINI
KKARLHEAGLPVGSWLKEVKQLIVDGAPDSHIFSATIYVEHRKEERVFDVGTMKREFTTI
TKGQKIAYVVDCRYDTDNEQRIIQLCQGATTLFCEAPFLEVDRDKAANRYHLTARQAGIL
GRKAGVQQLIVFHFSPRYTGQGDKLHREAMEAFHE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacaccctcgttctctcctcacctggtaaatcatccctttggagaccccggcctctat
gtcgatatacggtggagccggcgtgctcttctctttgacctaggggataatatgcccttg
agcccaacccagcttttacgggcgcaggatattttcatctctcatacgcatatggatcac
tttatcgggtttgatcggctcattcgtgtagccctgggtcgtggcaaacatcttcgattg
catggtccaccgggccttattgaaaatattcaaggcaaacttcgtgggtatacctggaat
ctggttgatggatatccgctcaccatcgaggccagggaatatcaccctacccatattcaa
cccgcgcattttcatgcgaagaacgccttcgcctgtaaacgggaatccataatcccaggc
gatcattctcacgtttttccggttcttcaagagccggctcttctcgtaaaagccgtcgca
ctcaaccatcggatcccttccctggccttttccctggaagaaccctttcacatcaatatt
aagaaagcccgacttcatgaggcagggcttccggttggctcctggcttaaggaagttaaa
caattaatcgtagatggcgccccggattcccacatcttttccgccacaatttatgttgag
caccgaaaagaagaacgcgtatttgatgtaggcaccatgaagcgagaatttacgaccatc
accaaggggcaaaaaatcgcttatgtcgttgattgccgatatgataccgacaatgagcag
cggatcattcaattatgccaaggggccacaacactattttgcgaggcaccctttttagaa
gtcgaccgggacaaggctgccaatcgctaccacctcaccgctcgtcaagccggaatcctt
ggacgaaaggccggggtacaacaattgatcgtctttcatttttctcccagatataccggg
cagggagacaaacttcaccgggaggccatggaagccttccatgagtag
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