Candidatus Nitrospira neomarina: PQG83_12440
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Entry
PQG83_12440 CDS
T09428
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PQG83_12440 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_12440 (mutS)
DNA repair and recombination proteins [BR:
nneo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PQG83_12440 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
T3SS_basalb_I
AAA_27
AAA_14
AAA_29
nSTAND_NTPase5
nSTAND3
HH_EMRA
AAA_23
TEX13B_C
Motif
Other DBs
NCBI-ProteinID:
WNM60568
UniProt:
A0AA96JUH9
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All DBs
Position
2888899..2891547
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AA seq
882 aa
AA seq
DB search
MKDQELSPLMRQFQDVKAQHPDAIVFFRVGDFYEMFFEDAEEASKLLGIVLTARGKAKGE
AIPLCGVPYHTSTGYIAKLLKAGKIVALCEQVEDPKLAKGLVRREVVRVYTPGTLYDHEL
LPAGEANFLSALCYTPLSSSENTTLANRFGLASLDLSTGEFWISESWMKHSLQSVVDELV
RLEPKEVIFPAGIQEAMTSAFQSLPIARIVPRDATTFGLEESQAILTRIFQVNHIEDLQL
HGLHSGLQAAGGLLHYLADTQPTLVHAHIRRPWIRLLEHEMQLDQTTLRNLEVLKPVSEL
RQSPTLLTTLDKTKTPMGTRLLREWIVRPLTQVTAIQLRQEAVKELTLHLGIRMTIREHL
KTVQDLERLNSRIVLEVANPRDLMNLHRSLENLLVLQQLLSSLTSPMLQTIHETWDPLLD
VSSWIGDAIIPNPPLSAKEGGIIQAGVNAELDELRILAKEGTRVLAEMETRERNRTGIDS
LKVKFNQVFGYYIEVTKANLSRVPSDYHRKQTLVNAERFTTGELQDLEGRLSSADQKMKN
LEGQLFGEIRLRVASATIRIQGMAQQLARLDVLTGLAEAASVNRYHQPTVHEGGTIQITE
GRHPVIEHLQQTEGFIPNDTILDLDTNRLLLITGPNMAGKSTYLRQVALIVLMAQMGSFV
PAESARIGIVDRIFTRVGAADDLSAGQSTFMVEMSETARILDTATSRSLLLLDEVGRGTS
TYDGLSIAWALAEYILDRGHLGARTLFATHYHEMTQLEALREGIKNYTVLVQEKGQDVLF
LRKIVQGKADRSYGIQVAKLAGIPKPVLDRAKNILSQLEQDTSSANVSIGEDSLDSTHLE
HLSPKPHVILDEVKQMDLFSMTPLEALNRLADFKARLNADNI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccaagaactctccccgctcatgcgccaatttcaggatgtaaaggctcaacat
cctgatgccattgtattttttcgtgttggggatttttatgaaatgttttttgaggacgcc
gaagaagcctcaaaactccttggcatcgtcttaacagcacgaggcaaggccaaaggggag
gccatccctctttgcggagtcccctatcacacctcaaccgggtatatcgcaaagctctta
aaggctgggaaaatagtggccttatgcgaacaagtcgaagaccctaagcttgccaaaggt
ctcgtccgtcgtgaagtcgtgcgagtctatacccctggcaccttatacgatcatgagttg
cttcccgcaggagaggccaatttcctgtcagcgctgtgttacaccccgttatcctcatcg
gagaataccactctagccaatcgcttcggactggcctccttagacctttcaaccggggaa
ttttggatatcggagtcctggatgaagcattcgctacaaagtgtcgtcgatgaactggtc
cgccttgagcccaaagaagtcatctttcctgctggaatacaggaagcaatgacttccgca
ttccaatccttgcctatcgcccgtatcgtgcctcgtgacgccacgacctttgggcttgag
gaaagccaggccatcctcacaagaattttccaagtcaatcatatcgaagacctccagctc
catggccttcattccggacttcaggctgcgggcggccttttacactacctggctgacact
cagcccacactcgtgcacgcccatatacggcgaccatggattcgactcctcgaacatgaa
atgcaattggatcagaccaccctgcgaaatttagaagtgctcaagcccgtatccgaacta
cgacaaagccctaccctactcacgacattggacaagaccaaaactcccatgggcacaaga
ctcttgcgggagtggatcgtccgtcccctgacccaggtcacggccatacaactacgccag
gaagccgtgaaagaattgacccttcatcttgggattcgcatgacgattcgtgagcatctg
aaaacggtacaagaccttgaacgactgaatagtcgaattgttttggaagtggccaaccca
cgcgacctcatgaatctacatcgctcccttgaaaatttgctggtacttcaacaactttta
tcgtctcttacgtctcccatgctacaaaccatccatgagacgtgggatcccctcctggat
gtctcatcctggattggcgacgccattattcccaatccacccctttcggccaaggaagga
ggcatcattcaagcaggggtgaatgcagaactcgatgagttgcgaattctggcaaaagaa
ggcaccagggtactggccgaaatggaaactcgtgaacgcaaccggaccggcatcgactct
ctcaaggtaaaattcaatcaggtctttggctattacattgaagtaacgaaagcgaattta
tcgcgagtcccttccgattaccaccggaaacaaaccctggtcaatgccgaacggtttact
accggtgagctgcaagacctcgaaggtcggctctcgagcgccgaccaaaagatgaaaaat
ttagaagggcagttatttggtgaaatccgtctccgtgtcgcatctgctaccatcagaatc
cagggaatggcgcagcaactggccaggttggacgtcctgacaggtttggcggaggcagct
tccgtcaaccggtatcatcagccgacggtccatgaaggcggaacaatccagatcacggaa
ggtcgacatccggttattgagcacctccaacagactgaaggatttattcccaacgataca
atactagacctggacaccaacagacttttattaataaccggtcccaatatggcaggaaaa
agcacctatttgcggcaggttgcccttattgtactgatggctcaaatgggaagctttgtg
ccggctgaatccgccagaataggaatcgtggaccggatttttaccagagtgggtgcagca
gatgacctcagcgccggccaaagcacattcatggtggaaatgagtgaaacagcaagaatt
ttggacaccgcgacttcgcgaagcttattgctgctggatgaagtgggcagaggaaccagc
acctatgacggactgagtattgcatgggcattggccgaatatatcttagatcgcggacat
ctgggagcacgaaccctttttgccacccactaccatgaaatgactcaattagaggccctc
cgggaaggaatcaagaactatacagtcctcgtccaggagaaagggcaggatgttctgttc
ttgagaaagatcgtccagggaaaggccgatcgaagctacggaattcaagtcgccaaactg
gcagggataccaaaaccggtactggatcgtgccaaaaatattctgtctcagcttgaacag
gatacctcgtctgcaaatgtgtcaatcggtgaggattccttagattccactcatctcgaa
cacctctcaccaaaacctcatgttatattggatgaagttaaacaaatggatcttttttct
atgactcctcttgaagctctcaataggcttgctgactttaaagccagattgaatgcggac
aatatataa
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