Candidatus Nitrospira neomarina: PQG83_12470
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Entry
PQG83_12470 CDS
T09428
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nneo03016
]
PQG83_12470 (truB)
Enzymes [BR:
nneo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PQG83_12470 (truB)
Transfer RNA biogenesis [BR:
nneo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PQG83_12470 (truB)
Prokaryotic type
PQG83_12470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WNM60574
UniProt:
A0AA96GLP3
LinkDB
All DBs
Position
complement(2896981..2897913)
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AA seq
310 aa
AA seq
DB search
MALHGVLNVNKPDGWTSHDVVQRLRSGLGIQKVGHAGTLDPHATGVLPILIGKGTKIAQY
LLGWDKEYGAVLQLGQRTDTQDAWGTVLEESPLESLTEDRIRSVFSTFQGSIQQVPPMYS
AVKIGGQPLYKKARRGETVDRPAKTVVIHDLEIQSLNVPEVAFRVVCSKGTYVRTLCEDI
GNILQVGGHLKWLQRRRVGPIHVDQAVGIESLLGGLEFTRLDGAFLGLDQALEGFPAVEV
DGDDARKVLHGNAISWDRVVNSYLEQKVSLMGDKMVRVKQKDGQLLALGRGPVFQSAKGG
PVLAIETVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccttacatggagttttgaatgtaaataagcctgatggatggacgtcacatgatgtg
gtgcaacgcctcaggtcgggtttgggtattcagaaagtcggacacgctggtactttggat
ccccatgcgacaggtgtattgccgattttaattggaaaaggaaccaaaattgcccagtat
ctgttgggatgggataaagaatatggcgctgtgcttcaattgggccaacggactgatacg
caggatgcctggggcacggtattggaagaatccccgctggaatctctgacggaggaccgt
attcgttccgtcttttcgacctttcaagggtctatccagcaagtgccacccatgtattcg
gcggtgaaaatcggggggcagcccctgtataaaaaagccagaagaggggaaacggttgac
cgaccggcaaaaacggtggtgatccatgatttagaaatccaaagtctgaatgtccctgag
gtggcatttcgggttgtctgttctaagggcacctatgttcgaacgctctgcgaggatatt
ggaaacatattgcaggtgggtggacatttgaaatggctccaacgaagacgggtcgggcct
attcatgttgatcaggcagttgggatagaatccctgcttggggggcttgaattcacacgt
ctggatggtgcatttttggggttagaccaggctttagaagggtttcccgcagtggaggtc
gatggagatgacgctcgaaaggtgctccatggaaatgcgatctcctgggatcgtgtggtc
aactcgtatttggaacaaaaagtttcgctcatgggggacaaaatggtgagagtgaaacag
aaagatgggcaattgctcgctttggggagaggcccggtgtttcagtcagccaagggaggt
cccgtattggcgattgaaacggtgtttgcctag
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