Candidatus Nitrospira neomarina: PQG83_13215
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Entry
PQG83_13215 CDS
T09428
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nneo03032
]
PQG83_13215
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_13215
Enzymes [BR:
nneo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PQG83_13215
DNA replication proteins [BR:
nneo03032
]
Prokaryotic type
DNA Topoisomerases
PQG83_13215
DNA repair and recombination proteins [BR:
nneo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PQG83_13215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Thymidylat_synt
Flu_M1
Motif
Other DBs
NCBI-ProteinID:
WNM60718
UniProt:
A0AA96JUQ8
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All DBs
Position
3077114..3079528
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AA seq
804 aa
AA seq
DB search
MAKRTRSGTDNSTTNPSATIPVLLDETTRQRYLNYALSVITSRALPDIRDGLKPVQRRIL
FSMFHNHRLVPDRPPIKSAKVVGSVIGEWHPHGDAAVYDAMARMAQPWSLRNTLVDGHGN
FGSQDGDRPAAYRYTEARLTPLALELLNELNKNTVDFQPNYDGKAEEPLVLPARFPNLLV
NGSTGIAVGMATNIPPHNLGEVIEAAIALIAKRDASISDLMKYLKGPDFPTGGEILNNKT
EIREMYETGQGSIRLRGEYEVKPLDHGKSAILITSIPFAVDKSTIVERIGELIITKKVPQ
LVDVRDESTTEVQIALETQKDADPHLAMAYLFKHTPLQNNFSVNLTCLVPVPGSTVARPD
CLNLKQMLEQFIDFRFVTVKRRFSYDLQVLEKRIHILNGFKLIFDALDQVLKIIRQSEGK
ADSANKLQQRFGLEPIQTDAILETPIYKLSRTEIKKMLDELADKLLQAKNLKTLLASNTK
LWDVVKKELEEVATAFGDKRRTKIGRRQTEEVEFDPDAFRVKEDAVITVSADGWIRRVGL
IKDLSKARVREGDRVMTILGGSTLESVVFFSNYGSAYSIRIGDIPPARSGFGDPAQKLFK
FKDGERIIEGLSFDPRVLATGVSALAPSKSRNLPLFDSTPTGLSGEAVAMTSSGMGIRFE
LDPFQEPSTRLGRKFCKLKEGEEVIGVSQVTAPLQKTVVAVVSARGRALLCQAEEVAQLA
GPGRGVIVLKLDQNDTVVGFRLLSSKEEELMLAKEDGGTLSVSLRKYQVVGRGGKGHPLL
KRGRLTGMMPTELTVPVFQAEVTP
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgaacccggtctggcaccgataattccaccaccaacccttcagcaaccatc
ccggttctattggatgagacaacacgtcaacgctacctcaattatgcgctctcggttatt
acctcacgggcccttccggatatccgggatggattgaaaccggtgcagcggcgcattttg
ttttccatgtttcacaatcatcgacttgtgcctgaccggcctcccatcaagagcgccaag
gtcgtggggtcggttatcggtgaatggcatccacatggggacgcggcggtttatgacgcg
atggctcgaatggcccagccctggtcattgcgtaacaccctggtggatggccatggaaat
ttcggcagccaggacggtgatcgtcccgccgcttatcgctataccgaagcccgtctgaca
cccctcgcactcgaactgctgaatgaactgaataaaaacacggtcgacttccaacccaat
tacgatggcaaagcggaagaaccgctggtactccccgcgcgctttcccaatctgctggtg
aatggctcaacaggcattgccgtgggcatggccaccaatatccctccccataatttagga
gaggtgatcgaggccgcgatcgccttgattgcgaaacgggatgcctcaatttccgatctc
atgaaatacctgaaaggcccggacttcccgacgggcggcgaaattttaaacaacaaaact
gagatccgggaaatgtatgagaccggacaggggtcgatccggcttcgcggagaatatgaa
gtcaaaccattggatcacgggaaatcagccattctcattacatccattccctttgccgtc
gataagtccacgattgtggaacggatcggcgaattaatcatcaccaaaaaggttccgcaa
ttggtggatgtccgggatgagtccacgaccgaagttcaaatcgcgctcgagacacaaaaa
gatgccgatccccatctggccatggcctatctctttaaacatacgccgctgcagaataac
ttttccgttaatttgacgtgcctggttccggtaccaggatcgaccgtggcgcgtcctgat
tgcctgaatctcaagcagatgctggaacagttcatcgactttcgctttgtcaccgttaag
cggagattcagctacgatttgcaagtcctggaaaagcgaatccatattctgaatgggttc
aaacttattttcgacgctctggatcaggtgctcaaaatcatccggcaaagtgagggtaaa
gccgattctgccaataaactccaacaacgattcggactcgaacccattcaaaccgacgcg
attttggaaacgcccatctataaattatcccgaactgaaatcaaaaaaatgctggatgag
ctggccgacaagctgctccaggccaaaaatctcaaaacccttctggcttccaataccaaa
ttatgggatgtggtcaaaaaagaactggaagaggttgctacagcgtttggagacaaacgt
cggaccaaaatcggccggcggcaaaccgaggaagtcgagtttgatccggacgcgttccgg
gttaaagaagatgcggtaatcaccgtttccgcagatggatggatccggcgagtcggcctt
attaaagatctttccaaagcacgggttcgggaaggcgatcgggtcatgacgattttaggc
gggagtacccttgaatcggtggtgttcttttctaattatggcagcgcgtactctattcgc
atcggcgatattccaccggcccgaagtggctttggagatccggcgcaaaagctttttaaa
ttcaaagatggcgaacggattattgagggactgagcttcgatccgcgtgtgctggcaacg
ggagtgtccgcccttgcaccgtcaaaaagtcgcaacctgcccctcttcgacagcacccca
accggtctatccggagaagccgtcgccatgacgtcaagcgggatgggaatccggtttgag
cttgaccccttccaggagccctcgacccgactgggccgaaaattttgtaaactcaaggaa
ggggaagaagtcatcggggtcagccaggtcactgctcctctgcaaaaaaccgtcgtagcg
gtcgtttccgcgcgaggacgagccctgctttgtcaggccgaagaggtggcgcaattggcc
ggacccggccgtggagtcatcgtcttaaaattagatcagaacgataccgtggttggattt
agattattgtcttcaaaagaggaagaactcatgcttgccaaagaagacggtggcactctt
tccgtctcccttcgcaagtaccaggtggtcggacgtggagggaaaggacatccattgctg
aagcggggtcgtctgaccggcatgatgccaactgaattgaccgtgccggttttccaagca
gaagttaccccttag
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