Candidatus Nitrospira neomarina: PQG83_13230
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Entry
PQG83_13230 CDS
T09428
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQG83_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_13230
Enzymes [BR:
nneo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PQG83_13230
DNA repair and recombination proteins [BR:
nneo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQG83_13230
Prokaryotic type
PQG83_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
DUF559
MTES_1575
DUF2726
Motif
Other DBs
NCBI-ProteinID:
WNM60721
UniProt:
A0AA96JZ12
LinkDB
All DBs
Position
3083829..3084878
Genome browser
AA seq
349 aa
AA seq
DB search
MTTKKGKPDLLPIKRRLRSNQTPAEQLLWSKLRGFQIHGFKFRRQHGIGSYIVDFFCPER
SLAIEVDGDVHANESKIKSDRQRENNLHSLGIKLIRYNNDDILHNLDGVLEDIALHVSKS
STAPNPSLQRRGRQKKEANPESYFPVTLQGLGNPPDPLPRIFFERPTLKVASELVGKVLI
KQTPNGIIQAKIVDTEAYVGPDDRACHASKGRTKRTEIMFGPAGFTYVYLIYGMYHCLNI
VTEQEQYPAAVLIRGLEILGGDHSPDLPKRIDGPGRVCRFLDVNRTHNGLDATLGTTLWI
EDHGLAVLPKQIQTLPRIGVDYAGEWAKKLWRFCLPASTPPKTRRVTPK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaaaaagggaaaccagaccttcttccgattaaacgtcggcttcgatcaaac
caaactccggctgagcaattgctttggtcaaaacttcgtggttttcaaattcacggcttc
aaatttcgtcgccaacatggaatcggatcatacattgtagatttcttttgcccggagaga
tccttggcgattgaagttgatggcgatgtgcacgcgaacgaaagtaaaatcaagagcgac
cgacaacgagagaataatttacattcattggggatcaagctcattcgatacaacaatgac
gacattctgcacaatctcgatggggttttagaagatattgcgttacatgtgtccaagagt
tctaccgcccctaacccctccttacaaaggaggggaaggcaaaaaaaggaagcaaatccg
gaatcctattttccagtcacacttcaagggcttggtaaccctccggatcctttaccgcga
atattttttgaacgaccaacgttaaaagttgcgtcagaactggtgggaaaggtgctgatc
aaacagacgccaaacgggatcatccaggccaaaattgtggatacggaagcctacgtggga
ccggatgatcgagcctgccatgcctctaaaggccgcacgaaacggacagaaattatgttc
ggccctgctggcttcacctatgtatacctgatttatggaatgtaccactgtctcaatatc
gtgacggaacaagagcaatatcctgccgcagtcttaattcgaggactggaaatcttggga
ggggatcattcgccggatttgccaaaacgcatcgacggtcccggcagggtctgccgattt
ttagacgtgaatcgcacgcataacggactggatgccacactcggcaccactctttggatc
gaagaccacggactggccgttttgcccaaacagattcaaactctgcctcgaatcggcgtg
gactatgcgggagaatgggcaaagaaattgtggcggttctgtctgccggcttcgactccc
ccaaaaacacgtcgagtcaccccgaagtaa
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