Candidatus Nitrospira neomarina: PQG83_13430
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Entry
PQG83_13430 CDS
T09428
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02020
Two-component system
nneo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PQG83_13430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQG83_13430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nneo03000
]
PQG83_13430
Transcription factors [BR:
nneo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PQG83_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_11
CNBH_CNNM2_C
HVO_A0261_N
MarR
NirdL-like_HTH
HTH_AsnC-type
HTH_36
HTH_5
HTH_24
RepL
HTH_20
GntR
HTH_28
HTH_23
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WNM60758
UniProt:
A0AA96GFA5
LinkDB
All DBs
Position
complement(3136233..3136901)
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AA seq
222 aa
AA seq
DB search
MVMYKQAIKNVPLFSELADQELNLLADSGSRRKFPDKNMIFQEGDSGEMLFIILSGKVKV
LLTGKNGQEFILSHLGPGNFFGEMAILESAPRSASVITAEPSEFFLLGQKELKKLLTNHP
DISMKILRNLSQRLRKVSEQVRSLVMFDMYGRVGRCLLDLAEFQDGIQTHGQLVISNRPS
FQELANMVGCSRETLSRTLKALKENGSLTVTRNTIYINRLWE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtacaaacaagcgattaaaaatgtcccactcttttccgaattagcggatcag
gaactcaatctgctggccgattctgggagtcgccgaaagttccctgacaaaaatatgata
tttcaagaaggcgattcaggcgaaatgttgttcattattttgtcaggcaaagttaaggtg
ctgttaaccgggaaaaacgggcaggaatttatcctctcgcacttaggtccagggaacttt
ttcggtgagatggccattcttgaatcggctccacgatctgcatcggtgataacagcggag
ccgagtgaattttttttattgggacaaaaggaattgaagaaactgttaacaaaccatcca
gacatttccatgaaaattctcaggaatctttctcaacgattgcgaaaagtcagcgaacaa
gttcgcagtctcgtgatgtttgatatgtatgggcgtgtgggtcgctgtcttcttgattta
gcagagtttcaggatggaattcagactcatgggcaactcgtgatatccaatcgcccatcc
ttccaggaattagccaacatggtaggatgctccagggaaaccttgagtcggacccttaag
gctctcaaggaaaacggaagtctgacggttacccgaaacacgatctatatcaatagatta
tgggaataa
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