Candidatus Nitrospira neomarina: PQG83_14030
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Entry
PQG83_14030 CDS
T09428
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
PQG83_14030
Enzymes [BR:
nneo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PQG83_14030
Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PQG83_14030
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
SH3_3
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
WNM60873
UniProt:
A0AA96GKT6
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All DBs
Position
3265267..3267186
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AA seq
639 aa
AA seq
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MPLRAAGFSRALLAGFSVTLFTLTLCPQPTRGETSFLPPKDSTETLTFNYAIANSYPRPA
TSIETQNSEASTIHNGQQSSILLGQTDETTPGIPGLSTENDPNQSSVEDLAQTPAPQIQS
SNAGKPVAPLSVVDVSQESNASHDQRIFLSDENKIEALDTQTQFSINSSTKLRFYPADSS
EQRTQVALARFAKVFDQTWEAPHQKKSGTYGTIPLVLNDSVEKNLEYFQYGIHERFQSYL
DRFHHYQDLVEPVFHELGLPPELMYLSLVESGFNPRAFSRSRASGPWQFMKGTGRVYGLD
VDWYLDERRDPIKSTVAAAHHLRDLYDQFGSWPLALGAYNAGSGKISRAIKKTGTRDFWK
IRRSRHIRRETKDYVPRFIAATLIAQNPTAYGFTTPDGDRHEFEEVLITKRVHLSAVTKQ
TGIPVEELQRLNPELRRSIVPSLTAPGYFLKVPLGMASLVEELHPTLAVWTQPPPPPTEW
HTVRRGESLSVVAKRYRMKVSQLKEMNNLRSNIIRVGTKLRVRGEVGDDDADSEITWYRV
RSGDSLGSIATRFRKSVNSLMRLNNLSTHIIHPGDRLRVKGEPSVSPSNKNNSKWYKVRR
GDSLWTIARQFSMSVNDLRALNNLSSSIIQAGRMLMVSQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgagctgctggtttttcccgcgccttactggctggcttcagtgtgactttg
ttcacgttaactctctgccctcaaccaacccgcggcgaaacctcttttttacctccaaag
gattctactgagactcttacgtttaattatgcaattgcgaatagctaccctcgaccagcg
acctcaattgagactcaaaactctgaggcaagcaccatccataacggtcaacaatcgtct
attcttctaggtcagactgatgaaaccactccaggcattccaggattatctaccgaaaat
gacccgaaccagtcttctgtggaagacctagctcaaaccccagcaccccagattcaatcc
tctaatgctggaaaaccggttgctcccctatcagtggttgatgtctctcaagaatctaac
gcttcccatgaccagcggatttttttatctgacgagaacaagattgaagccctggacact
caaactcaattttcaattaactcctctacaaaattacgtttttaccctgctgattcatct
gagcaacgaacgcaagttgccttagctcgatttgccaaagtcttcgatcaaacatgggaa
gccccccaccagaaaaaatctgggacatatggcaccattccccttgtcctgaacgattcc
gtagagaaaaaccttgaatattttcagtatggaattcatgaacgatttcaatcgtatctt
gaccgctttcatcattaccaagatcttgtagaacccgtttttcatgaactgggtctcccg
ccggaactcatgtatctttcactcgttgagagtgggttcaacccacgtgcattttctcga
tcccgtgcttccggcccctggcaatttatgaaagggaccgggcgtgtgtatggcctcgat
gtcgactggtatttggatgaacggcgggatccgattaaatccacagttgctgccgctcat
catcttcgtgatttatatgaccaatttggctcctggcctctggccctgggagcgtataat
gcggggagcggaaagatttcgcgagccatcaaaaaaacgggcacccgtgacttttggaag
attcgacggtcacgccatataagacgagaaactaaagactatgtgcctcgctttattgcg
gcaacccttatcgcccaaaatcctacagcctatggattcacgactccggacggtgatcgg
catgaatttgaagaagtcctgattacgaaacgcgttcatctttcggccgtcaccaaacaa
actgggattccggttgaggaactccaacggctgaaccctgaacttcgacgcagtatcgtg
cccagccttacggctcctggttattttttaaaggtacccctaggaatggcctcacttgtt
gaggaactccatccgacactcgctgtctggacacaacctcctcccccaccaacagaatgg
catacggtcagacgaggagagagtttatcggttgtagccaaacgatatagaatgaaggta
agtcagctgaaagaaatgaacaacttgcggagcaatataatacgagtaggaaccaaactc
cgggttcgtggcgaggttggtgacgatgatgctgactctgaaatcacctggtaccgcgtt
cgctccggggattctctgggaagcattgccacccgatttagaaaatctgttaattcactg
atgagactgaacaatctctctacccatatcattcatccaggagatcggttacgcgtaaaa
ggggaaccttcagtcagcccttcgaacaaaaacaactctaaatggtataaagtcagaagg
ggagatagtttatggacgattgcccggcaatttagtatgagtgtgaacgatttgcgagca
ctcaataacctctcttccagcattatccaggctggccgcatgttaatggttagccaataa
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