Candidatus Nitrospira neomarina: PQG83_14340
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Entry
PQG83_14340 CDS
T09428
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nneo03032
]
PQG83_14340
03036 Chromosome and associated proteins [BR:
nneo03036
]
PQG83_14340
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_14340
DNA replication proteins [BR:
nneo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PQG83_14340
Chromosome and associated proteins [BR:
nneo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PQG83_14340
DNA repair and recombination proteins [BR:
nneo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PQG83_14340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
A_thal_3526
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WNM60931
UniProt:
A0AA96JZA8
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All DBs
Position
complement(3338269..3338559)
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AA seq
96 aa
AA seq
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MGKAMTKSQIADHLAKKADVTKKIATQILDDFAALAYKEAKNAFVVPGIGKLVLAHRKAR
MGRNPQTGAAIKIPAKRVVKFRVAKAAKDAILGVKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggccatgacaaagtcgcagattgccgatcacctggctaaaaaagcggatgtt
accaagaaaattgccacgcaaattcttgatgattttgctgcgttggcttacaaggaagcc
aaaaatgcgtttgtggtacctggaatcggcaagttggtccttgcacaccgaaaagccaga
atgggcagaaatccccaaactggagctgcgattaaaatcccagccaaacgtgtcgtgaag
ttccgcgtagccaaggcggctaaagatgcgatcttgggggttaaaaagtaa
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