KEGG   Candidatus Nitrospira neomarina: PQG83_14650
Entry
PQG83_14650       CDS       T09428                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
nneo  Candidatus Nitrospira neomarina
Pathway
nneo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nneo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PQG83_14650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nneo02022]
    PQG83_14650
Two-component system [BR:nneo02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   PQG83_14650
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 CHASE2 AAA_5 HTH_8 AAA_2 AAA Mg_chelatase EzrA HTH_30 CENP-F_leu_zip SOAR Sec3_CC Filament AAA_16 HTH_23 Wtap Uso1_p115_C Fez1 FPP
Other DBs
NCBI-ProteinID: WNM60990
UniProt: A0AA96JVG0
LinkDB
Position
complement(3404454..3407075)
AA seq 873 aa
MIRTSMTDRFKTMTLALAFSLASTVLAFSVSSLFPQGERWLTDWQLAHMTPGPVDPSLVM
VTVTKSTSPALCGEGRWDLSVLESTLLSLHEAGAAVIVPSIDVSSPIASECGGLAGLVRL
AEVTKRVGSVVYPYSVPPALADAATALGTLDVIPDADGVFRGVKSHALSAGSSPHPPIGL
VMASLLSGTDTANPKINDPQFRFVGRWATSPFPRYVFADVWNIIQSKDRDQLTKMFRGKA
VMFFSPVSTNPTLSTPWESAVPAEFLHVLLTNAVLTKGWVSTTPVWVAFLLTVCVGLFFA
WFILREIPLIRLGMMGLPVILLAGLALLWGLHSGWVWPILSTSLALGMTVGGTLAWRLSR
SRSIIQRRITQGRQQLQQLETELAERQQHVHELETCLHVAHDHVHRSATVIEGLETQQGG
VSRQLECSQAEVEDTRRQIDRLQIELKDLRRQVPAMQHAGHQMSESRENQALLQECESLH
ILTRAPAVLRVFQDLKKASRTQGPILLLGETGTGKEVFARAAHALSPRRRGPFVSVNMAA
IRAELFEGELFGHVKGAFTGAVGREGYIETANGGTLFLDEVGELPSDLQAKLLRFLEDGS
FHRVGESRLTQVNVRIIAATNCNLQQDVEAGRYREDLYYRLRSIVLTLPPLRERGEEDYL
LLAQSFLQYFSRQQDRMNVMFTQGALDSIMAYHWPGNIRELRQTVAQAVALANGSLITEA
DLHLSRPVLPSVKGEGHGRVELERLEDDMVLECLRRHGFDMQVTAKALGWDRSTVTQRLK
GLGFQALVTYQGKIEAAAQALAGDETLAPMVARRLREYSKNLLPSSRHYTSAEEAVADCR
KRFRNLPERHFPAVEQLVHQRFATPEQNSTPQN
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgattaggacctcaatgacggatcgtttcaagaccatgacattggccctcgccttttca
ctggcgagcacggtgttggcttttagcgtctcctcactttttccccagggagaacgttgg
ttgactgattggcaactggcccacatgacccctggacctgtcgacccttcactggtcatg
gtgacggtcacaaagagcaccagtcccgcgttatgtggggaaggacgatgggatctttcc
gtgttggaatccacactgctgtcccttcatgaggctggcgctgcggttatcgttccttca
attgatgtgtcctccccgatagcctcggaatgtggggggttggctggactggttcgactg
gctgaagtgactaaacgagtcgggtctgtggtctacccgtattcggttcctcccgccttg
gccgatgcggcaaccgcactggggacactggacgtgatacctgatgcggatggggtgttt
aggggtgtgaagtcccatgccctttctgcaggttcatcgccacatcctccgatcggtctc
gtaatggcctcgttgttatcaggaacggacacagctaatccgaagatcaacgaccctcaa
ttccggtttgttggacgttgggccacttcaccctttcccaggtatgtctttgcggatgtg
tggaacatcattcagagtaaagatcgcgatcaattaaccaagatgtttcgcggaaaagcg
gtgatgtttttttctcctgtgtcgacgaatccaactctttcaaccccgtgggaatcagcg
gtgccggctgaatttcttcatgtcttattgaccaatgcggtactgaccaagggatgggtc
tccacgactcctgtatgggtcgctttcctgctgacagtgtgcgtaggactgttcttcgcc
tggtttattcttcgggaaattccgctgatccgccttgggatgatgggcctacccgttatt
cttcttgcggggcttgctctgctgtggggacttcatagtggttgggtgtggccgatcctg
agtacaagtttggctttaggaatgaccgtagggggaacgctggcttggcggttgtcccgg
tcccggtcgattatccaacggcggatcactcaagggcgacagcagctacaacaattggaa
acagagctggcagagagacaacagcatgtccatgaactcgagacttgcttgcatgtggca
cacgatcatgtacaccggtcggcaacggttattgaaggtttagaaactcagcaagggggg
gtgtctcgtcaattggagtgttcccaagccgaggtagaagatacccgacgacagattgac
cggttgcagattgaattgaaggatcttcgtcggcaggtgccggccatgcagcatgcaggg
catcagatgtccgaatcccgggagaatcaggcattactgcaagaatgtgagtcgcttcat
attctgacccgtgcccctgcggtccttcgcgtatttcaggatttaaaaaaagcgtctaga
acccagggccccattcttctattgggagaaacgggtacgggcaaagaggtgtttgcacga
gcggcccatgcattgagtccccggcgtcgtgggccatttgtgtcggtaaatatggctgcg
atccgggcggagttatttgaaggagaattgttcggccatgtgaagggagcctttaccggc
gcggttggtcgtgaggggtatattgaaacggcaaatggtggaacgctctttttggatgaa
gtcggcgaactcccatccgatttgcaagcaaaattgctgcggtttctggaggacgggtca
tttcaccgggttggagaaagccggctcactcaggtgaatgtgcgaattatcgcggcgaca
aattgcaatcttcaacaggatgtggaggccggccgataccgggaagatctctattatcga
ctgcggagtattgtgttgactctgcctcctcttcgggaacgaggggaggaagactatctt
ttgttggcccaatccttcctacagtatttttcccggcaacaggatcgaatgaatgtgatg
ttcacgcaaggggcactggattcgatcatggcctatcactggccaggcaatattcgagaa
cttcgacaaaccgtggcccaggccgtggcgttggccaacggttccctcattaccgaagca
gatttgcatctcagtagacccgtcctgccgtcagtgaagggtgagggacacggtcgggtg
gaactggaacgattggaagatgacatggtgttggaatgcctgcgacgtcatggattcgat
atgcaggtgacagctaaagctttagggtgggatcgcagcaccgtcacccaacgattgaaa
ggtcttggatttcaggcgttggtcacctatcagggaaagattgaagcggcggcgcaggcg
ttggccggggatgaaaccttggcccccatggtcgcgaggcgactgcgcgagtattcaaaa
aacctgcttccttcttccagacactatacgtctgctgaagaagcggtggctgactgccga
aaacggtttcgaaatcttccggagcgacattttccggcagtcgagcagttagtgcaccaa
cgctttgctacgccggaacaaaattcaacgccgcagaattaa

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