Candidatus Nitrospira neomarina: PQG83_14855
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Entry
PQG83_14855 CDS
T09428
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00300
Lysine biosynthesis
nneo00470
D-Amino acid metabolism
nneo01100
Metabolic pathways
nneo01110
Biosynthesis of secondary metabolites
nneo01120
Microbial metabolism in diverse environments
nneo01230
Biosynthesis of amino acids
Module
nneo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQG83_14855 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQG83_14855 (lysA)
Enzymes [BR:
nneo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PQG83_14855 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WNM61030
UniProt:
A0AA96GIN6
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All DBs
Position
3449861..3451123
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AA seq
420 aa
AA seq
DB search
MHDFHYQGDELFCEEVSIRHITEQVGTPCYIYSHRTLIRHFHAFDQAFNAIPHIVAFAMK
ANSNLTVLRLLAKEGCGADIVSGGELFRALTAGMAPNKIVFAGVGKSKEEIQYALESDIL
MFNVESPGELQQINEVAGSMGLRAKVALRINPDIDPKTHPYISTGLKKSKFGIGADRALE
EFDAAGNLPHIEVVGVHSHIGSQLTQVTPFVDALKKAITLIQTLQSKGVHIQYLNIGGGL
GITYSDETPPHPKELAEAISPLLQSVSCQIIMEPGRSIVGNAGILVTKVLYNKESADKHF
VIVDAAMNDLLRPSLYDAHHDIQPVLKKESSAVNTVDVVGPICESGDFLAKDRKMPHSQP
GDLLAVMSAGAYGFTMASNYNSRPRVPEVLVKGKDITVIRKRESYEDLIRGETISESFSN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactttcactaccagggagacgaattattctgtgaggaggtctccattcgccac
attacggaacaggtagggactccctgttacatttatagccatcggacattgattcgacat
tttcatgcttttgatcaagccttcaatgccattccacatatcgtggcttttgccatgaaa
gccaattcgaatctaaccgtcttacgtctcctcgccaaggaagggtgtggcgcagacatc
gtgtctggtggagaacttttccgcgcgttaacagccggaatggcgcccaacaaaattgtc
tttgccggggtcggcaaatccaaggaagaaattcaatatgcattggaatcagatattctg
atgttcaatgttgaatctccaggtgaattgcagcagatcaatgaggtcgctggctccatg
ggtcttcgcgccaaagtggcgttacgcatcaatccggatattgatcccaaaacccatccg
tacatttctaccggattaaaaaaaagcaaattcggaattggagcggaccgggcacttgaa
gaatttgacgcagcagggaatcttcctcacattgaagtagtaggcgttcactcacacatt
ggttcccaattaacccaggtcaccccatttgttgatgccttaaaaaaagcgatcacctta
attcaaacactgcaatccaaaggtgtccacattcaatatctcaacatcggcggaggactt
ggtattacctactcggacgaaacgcctccccatcccaaagagctggctgaagctatttcc
ccgttgctacaatccgtctcatgccagattattatggaaccgggccggtctattgtaggg
aatgcgggcatcttggtgacgaaagtgctgtataacaaggaaagcgcggacaagcatttt
gtgattgtcgatgccgcaatgaatgatctgttacgaccaagcttatatgatgctcaccac
gatattcagccggtcttaaaaaaagagtcatccgcagtcaacactgttgatgtagttgga
cccatttgcgaatcaggagattttttagcaaaagatcgaaaaatgccccattctcaacct
ggagatctcctggccgttatgagtgccggagcgtatggatttacaatggcttcaaattat
aattcccggccacgcgtccccgaggtgcttgtaaaagggaaggacattacagtcattcga
aaacgagaaagctatgaggacctcattcgaggcgaaaccatttcagaatccttctcgaat
tga
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