Candidatus Nitrospira neomarina: PQG83_15030
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Entry
PQG83_15030 CDS
T09428
Name
(GenBank) PAS domain S-box protein
Organism
nneo
Candidatus Nitrospira neomarina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_3
PAS_9
PAS
Response_reg
PAS_8
HATPase_c
PAS_11
HisKA
PAS_7
FleQ
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WNM61060
UniProt:
A0AA96GIQ2
LinkDB
All DBs
Position
complement(3489699..3493616)
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AA seq
1305 aa
AA seq
DB search
MEALRTTTPTILVVDDEVDICLALSDLLESEGYQVETVETGREALRRVSPVHSYSAVILD
LGLPDLDGLIVLQRLYGQDPTLPVVILTAHGDQKEKILTLQHHAFAHLIKPYDRQEVVEM
VHRAVAAKDLTWKAAQAEKALTSSESKRQIEQQRTQALLSESEQRLTLALKAGNMGIWDW
HIPTGHLICSEEVAGLFGLAHGMFDETFEAYENCIHPDDRPMLKDIIGRTLETGAPYEVE
HRIVWPTGEVRWIACKGQLVKDQDGLHQRMLGIVQDITTRKQAEIHLQDSQRFLTSIVDN
LPHMIFVKDAKDLRFIRFNQAGEKLIGYSKEAMIGKTDHDLFPKSEADFYTRKDREVLSG
KTLINIPEEVIHTQSHGTRYLHTKKIPILDGQGTPEYLLGISEDITEQKQAELERTERET
LLHLIFEMGPGCIKRVAADGTLLHINPAGLDLIEATNAEEVLGCSVFDLVVPEHLDAFKQ
MHHEVIQGKKQTLQFEVQSLKGTRSWIETYAVPFKNPITNEVEHLAVTHDITERKKSEEQ
AQRLSRQNELILSSAGDGIYGLDLEGRTTFVNPAGAKMLGYDPQELIGSLMHGTVHHSKS
DGSLYPRETCPMYAVYSDGVTRQVEDEVLWRKDGTSFPVDYTSTPIWQDGNLTGAVVTFR
DISERKQTEEAFNKSRAEFLTLVDSLEGIVWECELPSYRITFVSQQAERLLGYPINEWLE
NHDFFWGRLHEADKNRVMEYSREAILKKKNYEIEYRFLRKNGEMIWLRDLVTVVVERGQP
VKLRGVIFNITQTKQAETVLQESEERFRLLNEAIPQQVWTACPDGSLDYVNPRVLEYFGS
SFEEMIGHGWQQFLHPDDLPGCLDCWARARETNQPYEIEFRLLRGSDHAFRWHLGRALPV
FNSEGQVVKWFGSNTDITQLKQLENQVRQSQKMEAIGTLAGGIAHDFNNILMAIIGYTEL
AKQSARENIKAQRNLDEVLVAGQRAKELVQQILTFSRQTEQIQQPLDLQLLVKEIGKFLR
ATFPATIDIRQHFTEATSIILGDPIQMHQVLMNLCANAEYAMRGSGGVLELKLESVIGEP
DGIGAHPDLKGGAYVCLTVRDTGTGMTPDVVQRIFDPFFTTKRVGEGTGMGLAVVHGIVI
SYGGVIKVESEPGQGTLFSIYFPEMAATSYPEENPPLPQEVFKGRGHILFVEDEVPLARL
GEEAMKGLGYEVIVRMSSVEALETFRADPFRFDAVVTDQTMPHITGEALARQLLELRPDV
PIILCTGFSHSMTSEKAKAMGIRAFLLKPLLIKDLAWTLREVLDS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaggctctgagaaccaccacacccactatccttgttgtggatgacgaggtggacatt
tgtctcgccttgagtgatctgctggaaagtgaagggtatcaggttgagaccgtggagacc
ggaagggaagcgttacgtcgagtgtctcccgttcattcctatagtgccgtcatcctcgat
ttaggtctgcctgaccttgatggtctcattgtccttcaacggttgtatggacaggatccc
acccttcctgtggtcattcttacggcgcatggcgatcaaaaagaaaaaattctcactctg
caacatcatgcatttgcccacttgatcaaaccctatgaccggcaggaggtggttgagatg
gtgcatcgcgcggttgcggccaaggatttgacttggaaagctgcgcaggcggaaaaggcg
ctcacctccagtgaatcgaaacgccagatcgaacagcaacgtacgcaagccttgctttcc
gaaagtgagcaacggctgacgttggccttgaaggcgggaaatatggggatttgggactgg
catattccgaccggtcatcttatctgctcggaggaagttgccgggctcttcgggttggcc
catgggatgtttgatgaaacatttgaggcttacgaaaactgcattcatccagatgatcgc
ccgatgcttaaagacatcattgggagaacgctggagaccggggcgccttatgaagtcgag
catcgaattgtgtggccaaccggggaggtccggtggatcgcctgcaaggggcagcttgtt
aaagatcaggatggtctccaccaacgaatgctcggcatcgttcaagatatcaccaccagg
aaacaggcagagatccatttgcaggatagtcaacgctttttgacctccattgtggataat
ctcccgcatatgatttttgttaaagatgccaaagatctccgctttatccgcttcaatcaa
gccggagaaaagctcattggctattccaaggaagcgatgatcgggaaaaccgatcacgat
ttgttccccaaatcggaagcagacttttataccaggaaagatcgagaagtcttgtccggt
aaaaccctgattaatatcccggaggaggtcattcacacccaatctcatgggacacggtat
ctgcataccaaaaaaattccgatcttagatggtcagggaacccctgaatatcttttagga
atttcagaggatattactgagcagaagcaggcagaattggaacggacagaacgtgaaacg
ttgttacaccttatttttgaaatggggccaggttgcattaaacgggttgccgccgatgga
accctgctccacatcaatcctgcggggttggatttaatcgaagcgacaaatgccgaggag
gtgcttggatgttccgtctttgacctcgtcgtgcctgagcatctggatgcctttaagcag
atgcatcacgaggtgatacaggggaagaaacagacccttcaatttgaggtccagagcctc
aaaggcaccagaagttggatagaaacctatgcggtgccattcaaaaatcccatcacgaat
gaagtggaacatttagcggtcacccacgatattacggaacggaaaaagtcagaggagcag
gctcagcggttgtcccgtcagaatgaactgatcctgtcatcggcaggtgacgggatctat
ggattagatcttgagggtcggacgacctttgtcaatccggctggggcaaaaatgttgggg
tatgacccccaggagctcattggatcccttatgcatggaaccgtccatcattctaagtcc
gatggttctctttatccccgtgaaacctgccctatgtatgcggtctattcggacggagtt
actcggcaggtagaagatgaagtcttgtggcgcaaagacggcaccagtttcccggtggac
tataccagcaccccaatttggcaggatgggaatctgacaggagcggtcgtcacttttcga
gatatttccgagcgcaagcaaacggaagaggcgtttaataaatcgagagcggagtttttg
accttagtcgattcactggaggggattgtgtgggagtgtgagttgccttcttatcggatc
acctttgttagtcaacaggcggagcgcctgttggggtatcccataaatgaatggttggaa
aatcacgattttttctggggtcgtcttcatgaggctgacaaaaaccgggtgatggaatat
agcagggaagccattctcaagaaaaagaactatgaaatagaataccgatttctcaggaag
aatggggagatgatctggctaagagatctggtgaccgtggtggtggaacgtggtcagcct
gtgaaattgcgtggagtcatctttaatataacgcagacgaagcaggcagaaaccgttctt
caggagagtgaagagcggttcagacttttaaatgaagcgattcctcagcaggtatggacg
gcatgccctgatgggtctttagattatgtcaatccacgggttctcgagtatttcggttca
tcctttgaagagatgatcggtcatgggtggcagcaatttctgcatccggatgatctacct
ggatgtctggattgctgggccagggcacgtgaaaccaaccaaccctacgaaatcgaattt
cggctattgcgggggtcagaccatgctttccgatggcatctcgggcgggctcttcctgtt
tttaattcagaggggcaggtggtgaaatggtttggatccaacacagatatcactcaatta
aagcagttggaaaatcaggttcgccaatctcaaaaaatggaagcgattgggaccttggca
ggtggtattgcccatgatttcaataacattcttatggcgatcattggttatacggaactt
gccaaacagagtgccagggaaaatatcaaagcccaaaggaatcttgatgaggtgttggta
gctgggcagcgcgccaaggaattggttcagcaaattttgacattcagtcggcaaaccgag
caaatccagcagccgcttgaccttcaactgttggtcaaggaaattggcaaattccttcgt
gccacgttcccggcgaccatcgacattcggcaacatttcactgaggcgacctcgatcata
ttaggagatcctatccaaatgcatcaggtgttgatgaacctgtgtgccaacgccgaatac
gccatgcggggaagcggaggtgttcttgaattgaagttggagagtgtgattggtgaacct
gatgggattggcgcacatcctgatctaaagggaggtgcctatgtatgtctgacggttcgt
gataccggaacaggtatgactccggatgtcgtccaacgtatctttgatcccttctttacc
acgaagagggtcggtgaagggacgggaatgggcttggccgtggtccatggaatcgtcatc
agttatggcggtgttattaaggtggagagtgaacctggacagggaacgctgtttagcatt
tattttccggagatggcggccacgagttatccagaggaaaatcctccattgccacaagaa
gtgttcaagggccgagggcatatactttttgtggaagatgaggtgcccctcgccaggctt
ggggaggaggccatgaaggggttggggtatgaggttatagtgcgcatgagtagcgttgaa
gctctggaaacttttcgggccgatccctttcgatttgatgcggttgtgaccgatcaaacg
atgccgcatatcaccggcgaagctcttgcgcgtcaattgttagaacttagaccggacgtg
cctattatcctgtgtacggggtttagtcacagtatgacctcggaaaaggccaaagccatg
gggattcgtgcttttcttttaaagccgctgttgatcaaggatctcgcgtggactcttcgg
gaggttctggattcatga
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