Candidatus Nitrospira neomarina: PQG83_16130
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Entry
PQG83_16130 CDS
T09428
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00550
Peptidoglycan biosynthesis
nneo01100
Metabolic pathways
nneo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQG83_16130 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQG83_16130 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
PQG83_16130 (mrdA)
Enzymes [BR:
nneo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PQG83_16130 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nneo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PQG83_16130 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
LptC
Motif
Other DBs
NCBI-ProteinID:
WNM61266
UniProt:
A0AA96GGB6
LinkDB
All DBs
Position
complement(3730822..3732654)
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AA seq
610 aa
AA seq
DB search
MLDSSRQANELADIQNRLIFVKIGFLMLLVLLGLRLWQLQVRDGLHYQELARDNRTRSIV
LEPARGLLYDRNGELLANNIPSFQLYVSLEDIQDREALLAQLPHYVDIDQQEISNKLSIR
SRRGRVKIKADITLKEAALIESHRLEIPGVVIQPEYQRHYPLNTYASHVLGYVGEISESQ
LKDPEFSHLQGGRIIGQNGVERTFDEYLLGETGEEVIEVDALGYPKRSLSVRRPLAGDDL
YLTLDIRLQRLAEDLLGEEAGAIVALDPWNGDVLALASKPGFNPNDVSGGISAKDWQRFL
KDTRHPLTNRAIQGQYPPGSVFKIIMAAALLETQTLSAQEMIPCHGTFPFGRRAFRDWKA
GGHGQVDLTKAIAESCDVYFYKAGHQLGIDPIATYARQFGLGEKTGIALPSERSGLVPSS
EWKKRVKREPWYPGETISISIGQGFLTVTPIQMAKVAAIVATNGRVVQPRLLKASRIRRT
GTLKEKPEPPIRQLAIPLQTFAHIKEGLAAVVTKGTARLAQSEFVSIAGKTGTAQVVALK
PDGDKDKNKEPQKEFRDHAWFVAFAPVEHPKIAVAVLVEHMGHGGSASAPLAKTLIEAYM
GFETTQEPSL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttggattcttcccgccaggctaatgaacttgccgatattcaaaatcggttaatattc
gtcaagattggctttctgatgctattggtgttgctgggattacgcctttggcaattacag
gttcgagacggattgcactatcaagaacttgcccgcgacaatcgcactcgatccattgtc
ttagaaccggctcgaggacttctgtatgatcggaacggagaactcctcgccaataatatc
cccagcttccaactctatgtttcgttggaagacatacaggaccgtgaggcccttttagct
cagttacctcattacgtagatattgaccaacaagagatttccaataaactttcaataaga
agccgaagaggccgagtcaagatcaaagccgacattacgctgaaagaggccgcactcata
gaatcgcaccggcttgaaattcccggtgtggtgattcagcctgaatatcagcgtcactat
ccacttaacacctacgcctcgcacgtcctgggctacgtgggtgaaatttccgaatcacag
cttaaggacccggaattttctcatcttcagggaggacgcatcatcggacaaaatggagtg
gagcggacatttgatgaatatcttcttggagaaaccggagaggaagtgattgaagtcgat
gcgctggggtatccaaaacggtctctctctgttcgacgtcccctggccggggatgacttg
tacctgacgctggatattcgacttcagcgcctcgcagaggaccttctgggggaggaagcg
ggggccattgttgccctggacccctggaatggagacgttctggctcttgcgagtaaaccc
gggttcaaccccaatgatgtttcgggagggattagtgccaaggactggcaacgatttctc
aaagatacacgccaccctctcaccaatcgcgccattcaaggccaatatcctccagggtcg
gtatttaaaatcattatggccgcggccctcttggagactcaaaccctcagcgcacaggaa
atgatcccctgccatggaacctttccctttggaagacgggcctttcgtgattggaaggcg
ggaggccacggtcaggtcgacttaaccaaagccatcgcggaatcgtgcgatgtctacttt
tacaaagccggccatcaattgggcattgatcccatcgccacctatgcccgccaattcgga
ttaggtgaaaaaaccggcattgcgctgccttccgaacggtcgggccttgttccgtcctcg
gaatggaaaaaaagggtcaaacgggaaccatggtatcctggcgaaaccatttccatttct
attggacaaggatttttaaccgtgactcccattcagatggccaaagttgccgccatcgtc
gcaaccaatggacgggtggtccaaccccgcctgctcaaagcctctcgaattcggcgaacc
ggcacactcaaagaaaagccggagccacccattcgacaattggccattcctctccaaacg
tttgcccatatcaaggaaggattggcggcagtcgtcacgaagggtacagccagactggca
caatcagaattcgtgagcattgcaggcaagactggaacggcgcaagttgtcgccctgaaa
ccggatggagacaaggacaaaaacaaggagcctcaaaaagaattccgagaccatgcgtgg
tttgtggcctttgctccggtagaacacccgaagattgccgtggcggtattagttgaacac
atggggcatggaggctcagcgtccgcccccttggccaagacactcatcgaagcctatatg
ggttttgagaccacccaggagccctctctttga
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