Candidatus Nitrospira neomarina: PQG83_18025
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Entry
PQG83_18025 CDS
T09428
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nneo
Candidatus Nitrospira neomarina
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nneo03032
]
PQG83_18025
03036 Chromosome and associated proteins [BR:
nneo03036
]
PQG83_18025
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_18025
DNA replication proteins [BR:
nneo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PQG83_18025
Chromosome and associated proteins [BR:
nneo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PQG83_18025
DNA repair and recombination proteins [BR:
nneo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PQG83_18025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
YtxC
FAM199X
Motif
Other DBs
NCBI-ProteinID:
WNM61630
UniProt:
A0AA96GJR9
LinkDB
All DBs
Position
4178446..4178739
Genome browser
AA seq
97 aa
AA seq
DB search
MTKADLIEKLAEKAPQLSRRQAEVVVNTIFDSIRDSLKRGEKTEIRGFGSFRLRHRQTKE
GRNPKTGESVSVPEKRMPFFKAGKEIKELLNPELPPV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcggatctcatcgaaaagttggcggaaaaggctccccaattgagtcgaagg
caagccgaggtcgtagtcaacaccatttttgattctatccgtgattctttaaagcgtgga
gaaaaaacagaaatccgtggttttggaagttttcgtcttcgacaccgtcagaccaaagaa
gggcgaaaccctaaaactggagaatcggtgtcggtccctgaaaagcgcatgccgtttttt
aaagccggtaaagagatcaaagaattgttaaaccctgagttaccacctgtttaa
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