Candidatus Nitrospira neomarina: PQG83_19050
Help
Entry
PQG83_19050 CDS
T09428
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PQG83_19050 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nneo01007
]
PQG83_19050 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nneo03016
]
PQG83_19050 (lysS)
Enzymes [BR:
nneo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PQG83_19050 (lysS)
Amino acid related enzymes [BR:
nneo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PQG83_19050 (lysS)
Transfer RNA biogenesis [BR:
nneo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PQG83_19050 (lysS)
Prokaryotic type
Other AARSs
PQG83_19050 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WNM61817
UniProt:
A0AA96GIZ0
LinkDB
All DBs
Position
complement(4378922..4380409)
Genome browser
AA seq
495 aa
AA seq
DB search
MEELNEQQQQRLEKLHALQDGGLHPFGTRFPTSHTVEAILQSYTASTKEDLEGTPISCTV
AGRIVAMRRFGKAAFAALQEEGHRLQVYLKKDLLGDQSYELSQSFDLGDWIGVEGKLFRT
KTDELTVEVHRLTFLTKGLRPLPEKWHGLTDIETRYRQRYVDLIANPSVHQVFRTRSRII
NIIRSFLTEREYLEVETPMMHSIPGGATARPFVTHHNTLDVDLYLRVAPELYLKRLIVGG
FRRVFEINRNFRNEGISTIHNPEFTMLEFYQAYADYHDLMDLTEQLFHTLSLEVCGGSMV
EYQSQSISLAPPWRRVPYLDSIVEVNQLDPEVLSDQKKAIDAAKRLGVDYVPQASHVDIL
VNLFEATVEPTLIQPTFITDFPIEISPLARKKESNPALTDRFELFIGGRELANGFSELND
PLDQRQRFEAQVALRDAGDDEAHYLDEDFIRALEYGMPPTAGEGIGIDRLVMLLTNQASI
RDVILFPQLRPDRPL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattgaacgaacaacaacaacaacggctggaaaaactccacgcgctccaggat
ggagggcttcatccctttggtacacgttttcccacctcccacacggttgaggccattctt
caatcgtatacggcctcgaccaaagaagaccttgaaggtacaccgatttcgtgcacggtg
gccggacgcattgtggccatgcgccgttttggaaaggccgctttcgcagccctacaggaa
gaaggccatcgtctccaggtctacctcaagaaagatctgcttggggatcagtcctacgaa
ctttcgcagtcgtttgatttaggggattggatcggtgtcgaaggcaagttatttcgcacc
aaaaccgacgaactcacggtagaagtccatcgcctcacctttctcacgaaagggttacgg
ccgcttccggaaaaatggcacgggctcaccgacattgaaacccggtatcggcaacgctat
gtggatttgattgccaatccatcggtacaccaggtattccgcacgcgcagtcggatcatt
aatatcattcgttcgtttctcacagaacgagaatacctcgaagtggaaaccccgatgatg
cattccattcctggaggagccacggcacgcccgtttgtgacccatcacaacaccctcgac
gtagacttatatttgcgcgtggcaccggaactatacctcaagcgcctcattgtcgggggc
ttccggcgcgtctttgaaattaaccgcaatttccgcaatgaaggtatttccaccattcac
aatcctgaatttaccatgttggaattttatcaggcctatgcggattatcatgatctgatg
gacctgaccgaacagttgtttcacaccttgagtctggaagtatgcggaggctcaatggtg
gaataccagagccaaagcatttctctggcgccaccctggcgccgagtgccgtatctggat
tcgatcgtagaggtcaaccagttggaccctgaggtcctgtccgaccaaaagaaagccata
gacgcggcaaaacggttaggcgttgattatgtgccgcaagccagccatgtcgacatcctc
gtcaacctttttgaagccacagtcgagccaaccttgattcaaccaacattcattaccgat
tttcccattgagatctctcccttggccaggaaaaaagaatccaacccagccttgaccgac
cgatttgaactcttcattggtggacgggaattagccaatggattctctgagttaaacgac
ccattagaccaacgacaacgctttgaggcccaagtggccttgcgggatgcgggagacgac
gaagcccattatctggatgaggactttattcgagccctcgaatatggcatgcctcccaca
gcaggagaaggtattgggattgatcgactcgtcatgctactcaccaatcaggcctcaatt
cgcgatgtcattcttttcccccaacttcgaccggatcggcctttgtga
DBGET
integrated database retrieval system
