Nipponia nippon (crested ibis): 104008701
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Entry
104008701 CDS
T05756
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104008701 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104008701 (PBRM1)
03036 Chromosome and associated proteins [BR:
nni03036
]
104008701 (PBRM1)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104008701 (PBRM1)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
104008701 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104008701
NCBI-ProteinID:
XP_009458874
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFDDSHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD
YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL
FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDNQGTNSELSSP
GYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQN
GTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRI
RTPSNLTASKLTDPSSQGKGSVGDERNSSNKYYRNKRSAQGDRLSAITMALQYGSESDED
AALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFHLPSKKKY
PDYYQQIKAPISLQQIRTKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQ
QVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIRKQRMKILYNAVLEARESG
TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYAGEEAMIEDMKLMFRNA
RHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKLKLSRKSGISPKKSKYMTP
MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKKPVDMEKIRSHMMANK
YQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLL
IQELIHNLFVSVMSHQDDEGRCYSXPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQE
NMFDVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDV
EKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSSLHRTYSQDCSFKNSMYHVGD
YVYVEPAEANLQPHIVCIERLWEDSAGKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLC
PENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKV
DEEKHAETLEDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFI
KSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPM
TCILGKCAVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDD
EIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGESTPKSVKGSTK
KEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMIS
GYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVG
TPAPGASPFGQQIGILGPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPKTQRLLHSE
AYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWR
LRDLMLRDTLNIRQAYNIENV
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagaggcgaagagctacctcgccttccagcagtgtcagcggaggagacttt
gatgacagccaccactccacgaatataccaggcccaagcagaaagaggaggagactttcc
aatctcccaactgtagatcctattgctgtatgccatgaactttacaacaccatcagagat
tacaaagatgaacagggcaggctcctttgtgagcttttcattagggcaccgaagcgaaga
aatcagccagattattatgaagtggtttctcagccaatcgatttaatgaaaatccaacaa
aagctaaagatggaggaatatgatgatgtgaacgtgctgactgctgattttcagcttctc
tttaacaacgcgaaggcttactataagcctgattctcctgaatataaagctgcctgcaaa
ttatgggagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggag
gaagatgaagatgaggaaggacatgacaatcaaggcacaaattctgaattatcatctcca
ggatacctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaaccca
tcaggacgcctcataagtgaactgttccagaaacttccttctaaagtgcaatacccagat
tattatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaat
ggaacttacaaaagcattcatgcaatggccaaggatatagatcttctggcaaagaatgcc
aaaacctacaatgagcctggatcacaagtattcaaggatgcaaatgcaattaaaaaaata
tttaatatgaaaaaggctgaaattgaacacagtgagctggccaagtcaagtctccgaatc
aggactccatcaaatttgactgcttccaagctgacagatccttcctcacagggtaaaggc
agtgttggtgatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaa
ggggatcgtttatcagcaataaccatggcattgcaatatggatcagaaagtgatgaggat
gcagctctggctgctgcggctcgttatgaagaaggagaatccgaagcagagagcattact
tccttcatggacacttctaatcctctttatcagctttatgacacagttagaagttgccga
aataatcagggccagctcatatctgaaccctttttccacttgccctccaagaaaaaatat
cctgattattatcagcaaattaaagcacctatttcattgcagcagatcagaaccaaactg
aagaaccatgaatatgagactttagatcagttggaggctgatctgaacttgatgtttgaa
aatgccaagcgctacaatgttcccaattctgccatctataaaagagtactgaaaatgcag
caagttatgcaggcaaagaagaaggagcttgctaggagagatgacattgaggatggggac
agtatgatttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaat
atacgaaagcaacgaatgaagatcttatacaatgcagttctggaagctcgagaatcaggc
acaggcagacggctctgtgatctgtttatggttaagccatccaaaaaggactatccggac
tattataaaattatcttggagccaatggacttgaaaatgatagaacacaacatccgcaat
gataagtatgcaggggaagaagccatgattgaagacatgaagctcatgttccgaaatgca
aggcattataatgaggaaggctcccaggtatacaatgatgctcatatgctggaaaagatc
cttaaagaaaaaaggaaagaactgggacccttagctgaagatgatgatgttgcatcccct
aaactaaagctaagtagaaaaagtggcatttctcctaaaaaatcgaaatacatgactcca
atgcaacagaaactgaatgaggtctatgaagcagttaagaattacacggataaacgaggc
aggcgactgagcgccatcttcttgaggctgccatctcggtctgagcttcctgactattat
gtaaccattaaaaagcccgttgacatggaaaagatcagaagccatatgatggcaaataaa
taccaggatattgattccatggtagaggactttgtaatgatgttcaataacgcttgcaca
tataacgagccagaatctttgatttataaagatgctctggtcctacataaagttttgctt
gaaactcggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgcta
attcaggaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggc
agatgctatagtnntcctgctgttgatcccaacttcccaaataaacctcctctgactttt
gatattatccgaaaaaatgttgaaaataatcgctatagaagattggacttgttccaggag
aatatgtttgatgtactggagagggcaaggagaatgaacaggactgattcagagatttac
gaggatgcagttgaacttcagcagttctttattaaaattcgagacgaactttgtaagaat
ggagagattcttctgtcacctgctctcagctataccaccaagcatcttcacaacgatgta
gaaaaggaaaagaaggagaagctgcccaaagaaatagaggaggataagctcaaaagagag
gaggagaagagagaagctgaaaagagtgaagattcttctggatcagctgggctgtcaagc
ttgcatcggacctacagccaggattgcagcttcaagaacagcatgtaccatgtaggagat
tatgtgtatgtggagcctgctgaagccaacttgcaacctcacatagtctgtattgagagg
ctgtgggaagattcagctggtaaggaagtttttaaaagtgactattacaataaagttcct
gttagcaaaattttgggcaaatgcgtggtcatgtttgttaaggaatattttaaattgtgt
cctgaaaacttcagagatgaggatgtctatgtctgtgagtcacgttattctgcaaagaca
aaatcttttaaaaagataaaactgtggactatgcctgtaagctctgtaagatttgtccca
cgagatgtacccctgcctgtggtccgtgttgcttctgtatttgctaatacagacaaagta
gatgaggagaaacatgctgaaacactggaggacagtaaggtgggagaaagtatccttcat
cttgaaaaggacaaagaagatgttccagtagaaatgtccaatggagaacctggttgccat
tactttgaacagctctgctacaatgatatgtggcttaaggttggggactgtgtcttcata
aaatcacatgggttagtgcgacctcgggtaggaagaattgaaaagatgtgggtgcgagat
ggagctgcgtatttctttggcccaatctttatacatcctgaagaaactgaacatgaacca
actaaaatgttctacaagaaggaagtatttttgagtaacttggaggagacctgtccgatg
acttgcattttgggaaagtgtgcggttctgtcgttcaaagacttcctctcctgcagacca
acagaaatctctgaaaatgatgtttttctttgtgagagccgctacaatgaaagcgacaaa
caaatgaagaaatttaaagggctgaagaggttttcactatctgcaaaagttgtagatgac
gaaatatactattttagaaaacccatagttcctcagaaggaaccatctccactactggaa
aagaagattcaacagctagaagcaaaatttgctgagttggaaggaggcgatgaggacatg
gaagagatgggagaagaggaaggtgagtccactcccaagtctgttaagggcagcaccaag
aaggagggatcaaaaaggaagatcaacatgagtgggtacatcttatttagcagcgagatg
agagctgtgattaaagctcagcacccagactactcctttggagagctcagcaggcttgta
ggaactgaatggagaaacttggaagcaacaaagaaagcagaatatgaaggcatgataagt
ggctatccaccggtgctgccacctttgcagggcccagttgatggcattgttagcatgggc
agcatgcagccacttcacccaggggtgcccccaccccaccaacttccgccaggtatgcca
ggcatcccaggcatcccaccacccggtgttataggccaaaatgtgtcccccatggtaggc
actccagcacccggggcaagtccttttggacagcagataggaatccttggcccgccggga
cagcaggcacctcctccgtatcccggccagagcccagcaagtcagccagttatgcagcag
cccacaactcccatgttcgtctcccctccaccaaagacacagaggcttcttcattccgaa
gcctatctgaaatatattgaggggcttagtgccgaatcaaatagtattagcaagtgggac
cagacccttgcagcacgaagacgagatgtccacttatcaaaagagcaagagagccgactc
ccttcacactggttaaaaagtaaaggggctcataccacaatggccgatgcattatggcgt
ctgcgagacttgatgctacgagacacccttaatatccgtcaggcgtacaacatagaaaat
gtttag
DBGET
integrated database retrieval system
