Nipponia nippon (crested ibis): 104008790
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Entry
104008790 CDS
T05756
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104008790 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104008790 (ARID1B)
03021 Transcription machinery [BR:
nni03021
]
104008790 (ARID1B)
03036 Chromosome and associated proteins [BR:
nni03036
]
104008790 (ARID1B)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Helix-turn-helix
ARID
104008790 (ARID1B)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104008790 (ARID1B)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104008790 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
104008790
NCBI-ProteinID:
XP_009458967
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MGRTQGSPMDPMVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPVGMQGRAPAA
MGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQD
MSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLP
TGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQS
RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQ
TGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSG
PGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGP
GMGPPMPTVNRKAQEAAAAVMQAAANSAQTRQGNFPAMNQSGIMGSSSPYTQPMNNSSGL
MNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGPPQPESKSKDSYS
SQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEK
ITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQV
NKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQP
KIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSTVSV
HDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFM
TPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSN
MVPSNSDPSMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMD
GMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQ
MQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRT
DDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPS
PASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEA
SQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQ
LSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDE
CVDYFDEDEEEAEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFV
VDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDL
EGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLL
EDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLI
LLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSA
YTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLI
LATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNL
ISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHE
GRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggacacagggcagtccgatggatccaatggtcatgaagagacctcagttgtac
ggcatgggcaataaccctcactctcagacgcagcagagcagcccctaccccgggcagtcc
tacggccctcccggcccccagcgctatcccgtgggaatgcagggccgagccccggcagcc
atgggaggaatgcagtatccacagcaacagataccgcctcagtatggtcagcaaggtgta
agtggctactgccagcagggccagcagccatactacaaccagcagccgcagcctcaacat
ctgccaccccaggcacaatatctgtcacaggcccagcagaggtaccaggctcagcaggac
atgtctcaggaaggctatggaaccagatctcaacccccgatggccccaggaaagcctaac
catgaagacttgaatctaatccagcaagaaagaccatcaagcttaccagttgaagtcttg
gcctccgaggatgctacatttggacacaaggatttatctggatccattgacgacttgccg
actggaaccgaagcaaccctgagctcagccgttagcgcgtcaggctctacaagcagccaa
ggggagcagagcaaccctgcacagtctccgttctcccctcatgcttctccacatctctct
ggcatccccgggggcccatcgccttcccctgtaggctctcctgttggaagcaaccagtca
agatctggtcccatttctccagcgagtattccaggcagtcagatgccaccgcagcctcct
ggcagccagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggac
cgaggttttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcagcaa
actggaccttccatgtcaccacacccctcacctggaggccaggtgcatcctggaatcggt
agctttcagcagagtaattcaagtggtacttatgggcctcagatgagccagtatggacca
caaggaaactactccagaccacccacgtacagcggcgtgcccaacacaagttacagtggc
ccaggacccggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccag
ccttgcggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccattt
cctggcaacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggcccc
gggatgggcccacccatgccaactgtgaatcgtaaggcacaggaggcggctgctgcagtg
atgcaggctgctgcaaactccgctcagaccaggcaaggcaattttcctgccatgaatcag
agcggtattatgggatccagctccccctacacccagccgatgaacaacagctctggcttg
atgaacccgcaggctcctccttacagcatggcacctaacatggtgaacagttcaacagca
cctatgggtcttgcagatatgatgacacccggtgagtccaaactaccccttcctctcaaa
gcagatggcaaagaagaaggacccccccaacctgagagcaagtcaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
ccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagccca
ggctggccaaagactccatcaagccctaaatcaagttcctctaccacaactggagagaag
atcacaaaagtctatgaactaggaaacgagccggagcgcaagatgtgggtagatcggtac
ctcacgttcatggaggagaggggcacgcccgtggccagtctgccagctgtgggcaagaag
cccctggacctgttcaggctctatgtctgcgtcaaagagattggaggtttagcccaggtt
aataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcaagcagc
gcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagatt
gagcgaggggaggagccccctccagaagtcttcagcactggagatactaagaaacaacct
aagattcagccgccatctcctgctaattctggttccttgcaaggtcctcagactccacag
tctactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagca
tcaacacctcatggacagatgacacctatgcagggtggcagaaacagcacagttagtgtg
catgatcccttttctgacgtaagtgattcagcattcccgaagcgaaactccatgacgcca
aatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgccatatgag
ccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatg
acccctggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctgga
gcaatgtccaacatgagcatgagccagagacagcagttctcttatggaagtggctatgac
aggaggtcggatcatgggctgggtcctgaaggcagtatgggaccacctggtcaaagcaac
atggtgccttcaaacagtgacccaagcatgtactctcctaatcgttaccctggccagcaa
aggcatgaaccatacgggcagcagtatccaggacaaggacctccctcaggacagccacca
tatggaggacatcaacctggaatgtatccacagcagcagaactataagcgacacatggat
ggcatgtatgggcctccagccaaacgccatgaaggggatatgtataacatgcagtatggc
aaccagcaacaggaaatgtataaccagtacagcaacgcttacacggggcctgacaggagg
cccatgcagggacagtatccgtatccatataacagggagaggatgcagggcccaggacaa
atgcagcagcatggaatacctccccagatgattggtggccccatgcagtcatcatcctcc
agcgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccag
aacaggcaaggtccaggaggccctgcacaggccccaccgtatccagggatgaatcgcact
gatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtc
aaccaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacct
cctcagtcatcctaccagacgccaccctctatgccaaaccacatctctagagctccaagt
ccagcatccttccagcgctctttggaaaaccgtatgtctccaagcaagtctcctttccta
ccctccatgaagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacct
ccaccccaaccaccaccgattaggcgagaaattaccttccccccaggctctgtagaagca
tcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgag
gcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcgcta
gacactattaatattcttctgtatgatgacagcactgttgctactttcaacctctctcag
ttgtctggatttcttgagcttttagtagaatattttagaaaatgcctgattgacattttt
ggaatccttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaagca
gccaagaaagatgatagccagtccttggcagaggatactggaaaagaggagaacgatgaa
tgtgttgactattttgatgaagatgaggaggaggcggaagatgaaaaggtagaaggagaa
gaaaagagcattgttttttccactcctggtgccattgctgatccaagtgagaggccaaaa
caagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctctttgtc
gttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccactgg
cagcttgggggtggtgacacaactgagcatatccagactcactttgaaagcaagatggag
attcctccgcgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctc
gaggggaaaggtgaatctgaggaacaacaagaaaaaagtataacagcaaccattgatgat
gtcctctcagctcggccaggagcattgcctgaagactcaaactcgggttcccaaacagag
agcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaactgcta
gaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaagac
tccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcct
ggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttgatc
cttcttcaccatgagcatccagaaagaaagcgagcaccgcaaacttacgagaaagaggaa
gaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtc
ttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtctgct
tacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgccca
tctgcggaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcag
agacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatc
ttggccacccccccattcagtcgtcaggagaaactctatgctactttagttaggtacgtt
ggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcc
cagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttg
ataagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctc
atgcacatgcagcctccacctctggagccacctagcgtagacatgatgtgcagggcagcc
aaggccttgctggccatggctagagtggacgagaaccgctcagagttccttttgcacgag
ggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatc
tgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
