Nipponia nippon (crested ibis): 104008892
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Entry
104008892 CDS
T05756
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104008892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104008892
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104008892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
104008892
NCBI-ProteinID:
XP_009459096
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MAVRIDQRRKLRNFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPAAFAEPLQEEYGYE
GTDDTADYFTSNHQLTEVDRARLNSCLDQMREVLAESVPEQAMVQAVLDSKFDVQKAFDL
VLSQGSKQNVKTKNEDTVIVGKTTKGKTRDSQSARMESEIVPKVTKMTVSGKKQSMGFEV
PCVIAEENGHANTPQKGLLTEDASVASGVLEAVSKSTLSPQVVQVSEEQNTMPTPVKKSS
KTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKP
PQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGIILHDE
PVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFP
VLLHYQTVSEPATIKRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaggatagaccagagaagaaagctgagaaattttgaagatgatgatgtgtat
ggccaatcagtagaagatgattattgcatttctccttcaacagcagctcaatttatctac
tccagacgagacaaaccggcagcatttgctgagccattacaagaagaatatggctatgaa
ggtacagatgatactgctgattattttacatccaatcatcagttgactgaagttgataga
gcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgtaccagag
caagcaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttcgatctt
gtgctttcacaagggagtaagcaaaatgtgaagaccaagaatgaggacactgtgattgtg
ggaaagacgacaaaaggaaaaacaagggattcccagtcagccagaatggaatctgaaatt
gtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggatttgaagtt
ccatgtgtgattgctgaagaaaatggccatgctaacacacctcagaaaggactgttaact
gaagatgccagcgtagcttctggggtacttgaggcagtctcaaaatctactctttcaccc
caagtagtgcaggtttcagaagagcagaatacgatgcctactccagtaaaaaagtcaagc
aagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggaggaaagcaa
ctgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatgggtcat
ctgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacaggaatct
aagaaggctggcaaagcttcatttgcctatgcatgggtcttggatgaaactggtgaagaa
cgagaaaggggagtgacgatggatgtgggtatgaccaaattcgagacaaagactaaagta
attacactgatggatgctccaggccacaaagacttcattccaaatatgatcacaggagct
gcacaggctgatgtggctattttggttgtggatgctagcagaggagagtttgaagcaggg
tttgagacggggggacaaactcgagaacatggattattagtgcgctctcttggagtgaca
cagctagctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaagatttcag
gaaattacgagtaagcttggccaatttcttaaacaagctggctttaaggaatcagatgtg
gcttatatcccaactagtggccttggtggtgaaaatctggtcacaaggggtcagtcaagt
gacctcacacagtggtataaaggaaagtgtttgttagagcaaattgattctttcaagcca
ccacagagatcagtggataaaccatttaggttgtgtgttgctgatgtttttaaagaccaa
ggatcaggattttgtgtgactggtaaaatagaagcaggctatattcaagttggagaacga
cttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcatactgcatgatgaa
ccggttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatggatatc
atcaaaatcaatgttggctgtgtattttgtgatcccaaggaacccattaaagtttgcact
cgtttcagagctcgggttctcatcttcaatattgaggttccaatcactaaaggatttcct
gtgcttttacactatcaaactgtaagtgaacctgctactattaaaagactgttgagcgtc
ctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttgactaaagggcag
aatgctctaatagaactacagactcaaagacctgttgctctagagttgtataaagatttt
aaagagcttgggaggtttatgttacgctacagtggttccactattgctgcaggagttgtc
acagagattaaagaatga
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