Nipponia nippon (crested ibis): 104008985
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Entry
104008985 CDS
T05756
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04120
Ubiquitin mediated proteolysis
nni04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104008985 (UBE4B)
04120 Ubiquitin mediated proteolysis
104008985 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104008985 (UBE4B)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104008985 (UBE4B)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
U-box type E3
104008985 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
104008985
NCBI-ProteinID:
XP_009459212
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPGPPVVAPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPTTNFTSYVPMTGSSLTPPASSV
ATTSVPSITVSSHLTATSPSWMQPSSPRYRPYTVAHSGGFSASSIPRSLNISIPSSSPSP
PAMAASPPAMPVIASRQRPTTMGPPLFTASPSTLRRRSSLLNRIPSSMGGSGSSSVSDSC
SDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVL
QGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASK
ECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLG
AFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGE
TREAALNYMAAIVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIF
HPRCRIDLPTDETRVKATMEDVTAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPS
CRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADA
GLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLPLTPEVPKVFAALPEFYVEDVAEFL
FFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKF
FEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGT
FMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQAR
QSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPK
CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRK
AGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI
MDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcgaaggcgccttgctcggttggcaggtgga
ccatcttcccagcctaccacgccacttacgtcaccgcagagagagaccccacctgggcca
cctgtagtagcaccagccccggggccatcccatagtctaggcctaaatgtccatagcatg
accccagctacctctccaattggtgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatctaacagccttgaaacacaatctcagtctctc
tctcggtctcagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggcattgaaaacatggaggtcgatgagaatgatcgcagagagaagagg
agtctgacggataaggaacctctgtctgggtctgaagtatctgaggagcaagctttacag
ctggtctgtaagatcttcagagtctcttggaaggaccgagacagagatgttatcttcttg
aattcactctctgcccagtttaagcagaacccaaaggaagtgttttcagattttaaggac
ttgattgggcagattttgatggaagtgctgatgatgtccacccagtcaagggatgaaaac
ccatttgctagcctgacagctacatcacaaccaatcgctgcagctgcccggtctcctgac
agaagcctgattttaaacatgggctctaacccaggaagcagccctatgttctgtaatgtg
ggctcctttggttccagttcgttatccagtctctatgggactagtccagctcctactacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccactacatctgtgccttccattactgtcagctctcacctcacagcaacaagcccttct
tggatgcagccttcctctccgaggtaccggccatacactgttgcccattctggaggcttt
tcagcttcttccatcccgcgttccttgaatatttccatcccatctagttcaccaagtcct
ccagccatggctgctagccctccagccatgccagtcatcgcatccagacagagacccaca
acaatgggtccacctttgtttactgcttcacccagtaccttgcgcaggcgttcttcttta
ctgaacaggatcccttctagtatgggaggctctggcagctcaagtgtttccgattcctgc
agtgaccacttcaccattgaaaattgtaaggagacagagatgctgaactacctcattgag
tgttttgacagagttggaatagaggagagaaaagcaccaaagatgtgtagccagccaaca
gttagccagttactgagcaacatccgatcacagtgcatttcacatgctgctttggtgcta
cagggatccttaacgcaaccaaggtcattgcagcagcagtctttgctggtaccatatatg
ctgtgtaggaatctcccatttggctttatccaagaattggtgagaacaacttatcaggat
gaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtagcttccaaa
gagtgctcccttgatagtgacaattttaaatacccccttatggcactatgtgaactttgt
gaaatcaagtttgggaaaacacaccctatgtgcagtttggttgtctctttgcccttgtgg
ttgcctaaatctttaagcacaggtgcaggaagagagctgcaaagactttcctatcttgga
gccttcttcagtctctctgtctttgctgaagatgataacaaagtagttgaaaagtacttc
tcagggcctgcaattactcttgaaaacacccgtgttgttagccagtctttgcaacattac
ctggaattagcaaggcaagagctgttcaagattctacatagtattttactgaatggtgaa
actcgagaagcagctctcaattacatggcagctattgtcaatgccaacatgaaaaaggca
caaatgcagacagatgatcgtttggtatctacagatggctttatgctcaacttcttatgg
gtactacagcaactaagtacgaagataaagctggaaacagttgatcccatgtacatattt
catcccaggtgtcgtattgacctcccaacagatgagacaagagtgaaagcaacaatggag
gatgttacagcctggattgctgagctttacagggatccgtctccattttctgagccgaaa
ttcccaacagaatgtttcttcctaaccctgcatgcccatcatctctcaatcctgccaagc
tgccgtcggtacatacgtagactgcgggccatcagggaactcaacaggactgttgaagat
ttgaaaaacaatgaaagtcaatggaaggattctcctctggctaccaggcatagagaaatg
ctgaaacgttgcaagacacagcttaagaaactggtgaggtgcaaggcttgtgcagatgct
ggtttgctggatgaaaactttctcaggagatgtctgaatttctatggcatggtgattcag
ctgatgcttcgcattcttgaccctgcctatcccaacgtaaaattgcctttaactcctgaa
gttccgaaggtatttgcagcattgccagaattttacgtggaagatgttgctgaattttta
ttttttattgtacaatatgctcctcaggtgctttatgagccctgtactcaggacatagtg
atgttccttgttgtgatgctgtgcaaccagaactacatccgaaatccttatttagtagcc
aagctggtggaagtgatgttcatgacaaatccagctgttcagccccggacacaaaagttc
tttgaaatgattgagaatcatcctctctccactaaattgttagtcccctccttgatgaag
ttttacacagatgttgaacatactggagccactagcgaattctatgacaagtttacaatc
cgctaccacatcagcaccattttcaaaagcctctggcagaatatagctcaccatggtaca
tttatggaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaat
gacacaactttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaa
gaggagatgaagaataaagaacaatgggacctgctgcccagggatcagcagcaggctcgg
caatcgcagctagctcaggatgagcgcgtctctcgttcatatcttgccctggcaacagaa
actgttgatatgttccatatccttaccaagcaggttcaaaagccttttctcagacctgaa
cttggaccacgattggctgccatgttgaactttaacttacagcaactgtgtggccccaag
tgccgtgacctgaaagtcgaaaaccctgagaaatacgggtttgaaccaaagaagctgttg
gaccaactgactgacatttacctacagctagattgtgctcgctttgctaaagcaattgct
gatgatcagaggtcctacagtaaagagctctttgaggaggttatctcaaagatgagaaag
gctggcatcaagtcaaccatagcaatagagaaattcaaactgctcgcagagaaagtggag
gaaatcgttgccaagaatgcccgtgcagaaattgattacagcgatgctccggatgaattc
agagatccgcttatggacacgctgatgaccgatcctgtgcggctgccatctggaactatt
atggacaggtcgatcatcctgaggcatctgttgaactcttccactgatcctttcaatcgt
cagacgctgacagaaaatatgctggaaccagtgccagaactgaaagagcaaatccaagcc
tggatgagagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
