Nipponia nippon (crested ibis): 104009035
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Entry
104009035 CDS
T05756
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nni03037
]
104009035 (NPHP4)
Cilium and associated proteins [BR:
nni03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104009035 (NPHP4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104009035
NCBI-ProteinID:
XP_009459263
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Position
Unknown
AA seq
1381 aa
AA seq
DB search
MAPSDAFGRNLWFLESWLDALPVESRQRPGLASQRCGAQALLPRGSHRDDACVNHSSTGA
RPLAERARDRGAPPSQGKRPQKGAEYQLRLSLFDATYHHFFGRTWRSSRRAARADPPHPA
RATVYFHTSLNHPGIAAVVEVVAMAGKADGGSQHLSCGFGLIPLFGSGLEAADPAAEDRA
LKLYHGTPRALLHPRFQDPVEKNKYLMVMEKSHLQYTLKPHQPLETIFHLLPENLLVSGL
QTIPGLLPACGDTSDCLQKPRLMKPVTCYLERLSVQLYPSLEEFEEELLDLLNSDRLLKA
NAAPDGNGVVVRERRLHVGVHNGLRFIQVPQVAVLVPEAEAARGGCPGVLGSGARGAGQA
LVLRSRIHLSEMVPHPAFGVCFQLEYVFCASERADGKALPGSASGEAADMRSVRWAVWSP
VLDAGEADVVLPLRGGARRGPCQTLVYRTPPSSRIFNFQFQGKHVESGTVQFHVSTDLEE
HLVTAAEILRKDRDESEKPPTPSLSPLAPLRMEASPRGPGLSVSQLSALPRGRGQPPARC
RRGSRQEGGITHLEADLGSPDPDPSAGDQLRALPFTPLQVPIAAVGLQAGSSRTLLSRAS
LARLHTAGFPEILDCNQEPVEISEVADPASFSLQLEEADPLQGNEIILQFLAFSRDARDS
AEGTWPRTVFLTFQFYRFPPVTTPRLQLVSTDGGPVAGPAVPAQLLVRVNKDGTFGTGPP
GLQLKYMVDPAFLQPGEQRWFVRYLAEHSLQLDVWDGDSLLLVGSAAVKLEPLLRQGRAA
VRTHHELEVATTEYEPDVTVMGREALRHGALRPLGIRVAVRGRLHLCLANVGHPCEETPG
QAPSPLPSRSRIVPAPDSAVLVVGGGPSSRXGAVPWAGDAAVAPGLWFPPSRQGWQEQRA
RHARDLQLIDAYREHIKGESISRVLSQAITATHTVHAVLGTAEFFEFALKNPYGVQHTVT
IEVDHPELSVILDPREWRHFKELTKSVTPVEEEMFHLRDDLRPQVYLRPNETVRIPFKYQ
TFSADPAVVAAQGPAGLGAGADAAACSLGKSGARRTKHIQVSFQVSGGKPIALLRVKVEP
QPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGAPVGMPGGEPEMFVRCSDPDIICETKN
MGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPVQIWQFYLHSLQRLDVSCVAGQP
PRLSLLLRGTPAPRRVRAFTSHPQELEVDPDGAFLLPANGIQDLYIGVRPRRAGSRFIYL
NLVDVESHQLVSSWLLCLSCRQPLVSKAFEISLPAGGGRGCNKRITYTNPYPSPRLYFLC
TNRPDLLQFKEDSFQVAGGEMYTIGLRFAPSQGTGEEEILIHINDHEDKNEETFCVKVLY
Q
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggctcccagcgacgcttttggaagaaacctgtggtttttggaaagctggctcgatgcc
ctacccgtggaaagccggcagcgacccggcctcgcctcccagcggtgcggagcacaggct
ctgctaccgaggggctctcaccgggacgacgcctgcgttaaccacagcagcacgggagcc
cggccgctggccgagcgggcgcgggaccgcggggctcccccatcgcaaggaaaacggcct
caaaaaggagccgagtaccagctgcgcctctcccttttcgatgccacctaccaccacttc
ttcgggaggacgtggaggagcagccggcgagctgcccgcgccgacccgccgcacccggcc
agggcgaccgtttacttccacacctccttgaaccaccccggcatcgctgccgttgtggaa
gtggtggcgatggccggcaaagcggacgggggctctcagcatctctcctgcggcttcgga
ctcatccccctcttcggcagcgggttggaggcggcagacccagccgccgaggacagagcg
ctgaagctgtaccatgggacgccacgcgccttactgcacccgcgcttccaggaccccgtg
gaaaagaacaaatacctgatggtgatggagaagagccacctgcagtacacgctgaagccc
caccagcccctggagacgatatttcacctccttcctgaaaaccttctggtatctgggctg
cagaccattcccggcttgctgccagcatgcggagacaccagtgactgcttgcagaaaccc
cggctgatgaagccggtcacctgctatctggagaggctgtccgtccagctgtacccttcc
ctggaggaattcgaggaagaactgctggacttactgaacagcgatcgcttacttaaggct
aacgctgcgccggatggcaatggggtggtggttcgggagcggcggctgcacgtcggcgtc
cacaacggcctgcgcttcatccaggtgccgcaggtggctgtgctggtgccggaggcagag
gcggcacggggcggctgcccgggggtgctgggctccggagccaggggtgcaggtcaagcc
ctggtcctgaggagccgcatccacctgagtgaaatggtcccccacccggcatttggggtc
tgcttccagctggagtacgtcttctgcgcctcggagagagccgacgggaaggccctgccc
ggcagcgccagcggcgaggcggctgacatgcgctcggtgcgctgggccgtctggagcccc
gtcctggacgccggtgaggcagatgtggttctgcccctgcgtggcggcgcccgccgtggc
ccctgccaaaccctggtctaccggaccccgccgagcagcaggatatttaatttccaattt
caggggaagcatgtggagtctgggactgtccaattccatgtttccactgatttggaagaa
catcttgtaactgctgcagagatcctacgtaaagacagggacgagtcagagaagcctcct
acgccatcgctgagtccgctggccccgctgcgaatggaggcctccccgcggggaccgggg
ctgtcggtgtcccagttgtcggccctgccgcggggcaggggccagccgccggcgcggtgc
cgccgtggctctcggcaggagggggggatcactcacctggaggctgacctcggctcacca
gacccggaccccagcgctggcgaccagctgcgggcactgcccttcaccccgctgcaggtg
cccatcgctgctgtggggctgcaggcaggcagttcccgcacgctgctctcccgtgcctcc
ctggcgcgcctgcacaccgccggcttcccggagatcctggactgcaaccaggagccggtg
gaaatctcggaggtggcagacccggcgagtttcagcctgcagctggaagaagccgaccct
ctgcaaggcaacgaaataatcctgcagttcctggcttttagcagggatgcccgggacagc
gcagagggtacgtggccgaggacggtcttcctcaccttccagttctaccgtttcccgccg
gtcaccacgccgcggctgcagctggtcagcacggatggggggccggtggccgggccggct
gtgccggcgcagctccttgtccgggtgaacaaggacgggacctttggcactggaccgccg
ggcttgcagctgaagtacatggtggatcccgctttcctgcagcctggggagcagcgctgg
tttgtgcggtacctggccgagcacagcctccagcttgacgtctgggatggagattccctg
ctccttgttgggtccgctgctgttaaactggagcccctgctgcgccagggccgggcggcc
gtcaggacccaccacgagctggaggtggccacgaccgagtacgagccggacgtgacggtg
atgggccgggaagcgctgcggcacggcgccctgcggcccctcggcatccgtgtggcggtg
aggggccgcctccacctctgcctggccaacgttggccacccgtgcgaggagaccccgggg
caggcaccatctccgctgccgtcccgctcccgcatcgtccctgcgccggacagcgctgtg
ctggtggtgggaggaggccccagctctcggtaaggagcagtgccgtgggctggggatgct
gcggtggctccgggcttatggttccctccctcccggcagggctggcaggagcagcgcgcc
cggcatgcgcgggacctgcagctcatcgacgcctaccgggagcacatcaagggtgagagc
atctcccgggtgctcagccaggccatcactgccacccacaccgtgcacgccgtgctgggg
acggctgagttctttgagttcgccctgaagaacccctatggcgtccagcacacagtgacc
attgaggtcgaccaccccgagctcagtgttatactggacccgagggagtggcggcacttc
aaggagctgaccaagagcgttacaccggtggaggaggagatgttccacctccgtgatgac
ctcaggcctcaggtctacctgcgccccaacgagaccgtccgcatccccttcaaataccag
accttctccgcagaccccgcggtcgttgcggcacaggggcctgcagggctgggcgctggt
gccgacgcggctgcctgctccctggggaagagtggggccaggcggacgaagcacatccag
gtctccttccaggtgagcggggggaagcccatcgcgctcctgcgggtgaaggtggagccg
caaccccacgtggtggaccagaccttccgcttctaccacccggagctcaccttcctgaag
aagaccatccggctgcccccctggcacaccctccccggcgcacccgtggggatgccgggg
ggagagccagagatgtttgttcgctgcagcgaccctgacatcatttgcgaaaccaaaaat
atggggcctggggagccacaggatgtcttcttaaaagtagccggaggaccaagcccacag
atcaaaaagttcttcgttgctatttatacggacgcctggctggcggcacccgtccagatc
tggcagttctacctgcactcgctgcagcgcctggacgtcagctgcgtggccgggcagccc
ccccgcctctccctgctgctgcggggcaccccggccccgcggagggtgcgggcgttcacc
tcccacccccaggagctggaggtggatccggacggtgccttccttctccctgccaacggc
atccaggacctgtacatcggcgtgaggcctcggcgggctggcagcaggttcatctacctc
aacctggtggatgtggagtcccaccagctggtgtcctcctggctgctctgcctctcctgc
agacagcccctcgtctccaaggcgttcgagatctcgctccccgcgggaggcggaagaggc
tgcaacaagcgcatcacctacaccaacccctacccctcgcccaggctctacttcttgtgc
accaaccggcccgacctcctgcagttcaaggaggactccttccaggttgccggcggggag
atgtacaccatcggcctgcgcttcgccccgagccagggcacgggtgaggaggagatcctg
attcacatcaacgaccacgaggacaagaatgaggaaaccttctgtgtgaaggtcctctac
cagtga
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