Nipponia nippon (crested ibis): 104009072
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Entry
104009072 CDS
T05756
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104009072 (CLSTN1)
Cell adhesion molecules [BR:
nni04515
]
Cadherins
Cadherin related
104009072 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Piezo_TM1-24
Zip
Motif
Other DBs
NCBI-GeneID:
104009072
NCBI-ProteinID:
XP_009459299
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MLQNIQSLFVRKDLHLSFTAFMFLDAHSAIEGEGEGGETQPDPGPPCPALPGAGRPLEAP
LSSGLGEASACGGESRDGAWAVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLR
FAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQ
AYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATAIEGKRYDNILKVEAVD
ADCSPQFSQICNYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAE
DVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLETCDEPITSIQATVELETNH
IGKGCDRDTYSEKSIHRLCGASSGTAELLPPPSSAANWTTGLPTDNGHDSDQVFEFNGTQ
AVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVF
LFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSYDPFPVTEDYP
LHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGLMIRSGKLEN
KKVIDCLYTCKEGLDLQVADGVGKGVKIHMNPSQSTLTLEGDDIDRVDKAMQHISYLNSR
QFPTPGIRRLKITSVVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFE
SSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEVTVLGEELNQ
EQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTVSLFDRKFK
LVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTFVDLSGHNLANPH
PFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTIT
VNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQL
EWDDSTLSY
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaatattcagtctctctttgtaaggaaagacttgcatctttccttcactgct
ttcatgtttctagatgcacattctgcaatagaaggggagggcgagggtggcgaaacgcag
ccggacccggggccgccctgccctgccctgccgggagccggccgcccgctggaagcgccg
ctctcctcagggctcggagaggcgtctgcctgcggcggggagagccgcgacggggcttgg
gctgttaacaagcataagccatggattgaaacaacctatcatggtatagttacagaaaat
gacaacacggtgctcttggaccccccgttaatagccctggacaaagatgcgcctctgcgt
tttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaaatt
cacgggcaaaatgttccctttgaagcagtggtagtggataaatccactggtgaggggata
atacgctctaaagaaaagcttgactgtgaactacagaaggactacacattcaccatacag
gcctatgactgtgggaaggggccagatggagcaaatgcaaaaaaatcccacaaagcaaca
gtacatattcaggtgaacgatgttaatgagtatgctcctgtcttcaaagagaagtcatac
aaggcaacggctattgaagggaagaggtacgacaatatcctgaaagtggaagccgtggat
gcagactgttcacctcaattcagccagatttgcaattatgaaattgtaactccggatgta
ccttttgctattgacaaagatggttatataaaaaacacagaaaagttaaactatggtaaa
gaacatcagtataaactgacagtaacagcgtatgactgtgggaagaagagagctgctgag
gatgtgttggttaaaattagcattaagcctacatgcaagcctggctggcaaggctggagc
aaaagaatagaatatgagcctggtactggttcgttagctctcttccccagtatgcgtttg
gagacatgcgatgagccaataacctcaattcaagcaacggttgaactagaaaccaaccat
attggtaaaggctgtgatagagacacctactctgagaaatccattcacagactctgtggt
gcttcttctggtacagctgaacttcttccccctccaagtagtgctgctaactggacaaca
ggacttcctaccgataatggtcatgacagtgaccaagtctttgaatttaatggcacgcaa
gctgtgaagattccagatggcgttgtcacagtcaatctaaaagagcccttcatgatttca
gtatggatgaggcatgggcctggaaccaaagagaaagagacaattctgtgcaattcagac
aagacagatatgaaccggcaccactacacactctatgtacacaactgccgacttgttttc
ctcttccgccaagatccttcagaggggaaaacctacaaacctgctgaatttcactggaaa
ctcaatcaggtgtgtgacaaagagtggcatcattatgtcctcaatgttgaatttcctgcg
gtaactctttatgtggacggtgtttcatatgatcctttcccagtgacggaagattaccca
cttcatccttcaaagatagaaacacagctagtagttggagcatgttggcaagaatataca
ggaaatgaaaatgacaatgaaactgtgcctgagacctctgcaggtggtgaactccacatg
gctcagtttttccgaggcaatctggcaggtttgatgattcgttctgggaaactggaaaac
aagaaggtgatagattgcctatatacttgcaaagagggactggatttgcaagtggctgat
ggtgttggcaaaggcgtgaagatccacatgaacccaagtcagtcaaccctgaccttagaa
ggggacgatattgaccgagttgataaggccatgcaacacatttcctatctgaattcccgc
cagttcccaacacctgggattcggaggcttaaaatcaccagtgttgtcaaatgtttcaat
gaagaggcctgtgtctccattccttctgtggagggatatgtaatggtcttgcaaccagag
gaaccaaaaatcagccttagtggcatcaaccattttgcccgctctgcttcagagtttgag
agctccgagggtgtttccctctttcctgagcttcgcataataagcaccattacccgggag
gtggagccagagggagatggagatgaagatccgacagtacaagagtctttggtatctgaa
gagatcatgcacaacctggatacgtgtgaggtgacagtgctaggagaggaactaaaccag
gaacaagaaagcctggagatcgacatgacacgattacagcagaaaggcattgagatgagt
agttccaacctgggcatgataatcacaggggttgatacgatggctagttacgaagaagtt
ttgcatttgatacgttacagaaactggcacaccgtttctctctttgacagaaagttcaaa
ttagtctgttctgagcttaacgggcgctatgtcagcaatgagtttaaagtggaggtgaat
gttatccacacagctaacccagtcgaacatgctaatcacatagccgcacaaccacagttt
gttcatccagtgcatcatacatttgttgatctctctggtcacaacttagctaaccctcac
ccattttcagttgttcccagtacagccactgtcgtgatcgtagtttgtgtcagtttcctg
gtttttatgattatcctgggagtgttccgaatccgagctgcacatcagagaacgatgcgt
gaccaggacactgggaaggaaaatgagatggactgggatgactctgctttgaccatcact
gtgaaccccatggagacttatgaggatcaacacagcagtgaagaggaagaggaggaggag
gaagaagaaagcgaagacggggaagaagatgacatcactagcgcggagtctgaaagcagt
gaggaggaggagggggagcaggaggaggaccaacagaatgtcaacagacagcagcagctg
gaatgggatgactctaccctcagctattga
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integrated database retrieval system
