Nipponia nippon (crested ibis): 104009079
Help
Entry
104009079 CDS
T05756
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104009079 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104009079 (EXOSC10)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104009079 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
104009079
NCBI-ProteinID:
XP_009459305
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MSSMRGLFRHAAWGRQRAALAPSTRAHAPPSSRLDDRVLARSSERRVAGGYALGTVVAAT
KASNGLPQPGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHMKDRSKVTELE
DKFDMLVDSNDIILERVGILLDEAAGVNKNQQPVLPAGLQPPQMIISSWNRKAGESHKRT
QSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALTKSGRERKERP
EDLDVPAALADFIHQQRTQQTEQDMFAHPYQYELEHFSPPDGVLKKPEPQMYRPIKETPC
HFITTLDELVELNEKLMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSD
MNILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGRHSLDHLLK
LYCNVDADKQYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVREALWERGNEQPTQLQV
VWQRSKDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFAWRDKMARQEDEST
GYVLPNHMLLKIAEELPKEPQGIIACCNPVPPLVRQQINELHLLIQQAREMPLVKSEITL
AVKKRAPLSSPERLENTFFGPHDSSRIPMDDFQNNPALEPAPILERGCLFSDSERTMNIQ
DVQPESTCLVATATVSIFSECDEDEGNEKALTTAQQKAQRIMESFENPFRMYLPSEQNPA
YVSQSAKFDPSSKIYEISNRWKLMSQTQVQKESKDETKKKAAQQSAARDQAQKVYKEATE
NIVSVRQQAMQEQANKKRERVMSETGTELPKQEKKRPKASQQPEELEAPKQFTPFDYSKS
NFKVFAGSSKSKQSPQFDPAKQAYAGKKFAGANKLQQSGNRSMSYLAGKADRGSRHHWPK
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatgcggggcctgttccgccacgccgcctgggggcgccagagggcagccctg
gcgccctctacccgtgcgcatgcgcccccctcaagccgcctcgacgaccgcgttctcgcg
agatcgtctgagcgtcgcgtggctggggggtatgctcttggcacagtggtggctgccaca
aaggcatctaatgggcttcctcagcctggtgatgagtatgacttctaccgaagcttccct
ggcttccgggcgtactgtgaaacacagggtgaccgtctccttcactgcatgagcaaggtg
atgcaataccatggctgccgtagccacatgaaagatcgcagcaaagtgacagagctggaa
gataaatttgatatgctggttgactccaatgacatcattcttgaaagagtgggtatttta
ttggatgaagcagcaggagtgaacaaaaaccagcaaccagttcttcctgctgggttacag
cccccacagatgatcatttccagctggaaccgcaaggcgggagaatcccacaaaagaact
cagtctgaaaccttccgactgcttcatgccaagaatatctctcgaccacagctcaagttt
cgggaaaagattgacaattccaacactccctttgtacctaaactttttatcaagccaaat
gctttgaaacctttgcctgaagccctcacaaaaagtggacgggaacgaaaggagcgccct
gaagacttggatgtaccagctgctttagcagacttcatacaccagcagaggacgcagcaa
actgagcaagacatgtttgctcacccttaccagtatgaactggagcatttttctccacca
gatggagttctcaagaaaccagaaccccagatgtacaggcccatcaaggaaacaccctgt
cattttatcaccacactggatgagctcgtagaactaaatgaaaagcttatgaactgtaaa
gaatttgccctggacttagagcaccattcctacaggagcttcctgggcttgacatgcctg
atgcagatttccacccgaacagaagacttcattattgatacactggaattgcgcagcgac
atgaacattctcaacgagaccttcacagaccctgcaattgtgaaggtccttcatggtgct
gattcagatgtggaatggctgcaaaaagactttggtctgtacttggtgaacatgttcgat
actcaccaagctgctcgtctcctcaatcttggcaggcattctttggaccacttgctaaag
ctgtattgcaatgtagatgctgacaagcagtaccagctggctgactggaggatacgccct
ttgccagaagaaatgattcagtatgcccgtgatgacactcactacttgctctacatctat
gataaagtaagggaggcgctgtgggagagagggaacgagcagcccactcagctgcaggtt
gtgtggcaacgcagcaaggacatctgcctgaagaaatacatcaagcccctcttttcagat
gaatcctaccttgagctctacaggaggcagaaaaaacatctcaacacacagcagctagca
gcatttaggttgctgtttgcatggagagacaagatggcgcgtcaagaggatgagagtaca
ggatatgtgctaccaaatcatatgctattgaagatagcagaggagctgcccaaagaaccc
cagggcatcattgcttgctgtaatccagtcccaccactagttcgccagcagattaatgaa
ttgcatcttctcattcagcaggcccgggagatgcctcttgtcaagtcagagatcactttg
gcagtcaagaagagagcacctctgtccagccctgagaggctggagaataccttctttgga
ccacatgacagttcccggattcctatggatgattttcagaacaaccctgccttggagcct
gcacctattttggaacgtggttgtctcttttcagacagtgagaggacaatgaatattcag
gatgttcagccagagtcaacatgtcttgttgctactgccactgtcagcatattcagtgaa
tgtgatgaagatgaaggaaatgagaaggctttaaccactgcacagcagaaagctcagcgt
ataatggagtcctttgaaaatccatttagaatgtacctaccttcagaacagaatcctgcc
tatgtctcacaatcggcaaagtttgacccgtcatcaaaaatttatgaaatcagcaatcga
tggaagttgatgagtcagacgcaagtacagaaggagtccaaagatgaaaccaaaaagaaa
gcagcccagcagtcagctgctcgtgaccaggcacagaaggtgtataaagaggcaacagaa
aatattgtgtctgttcgtcagcaagctatgcaggagcaagctaataagaagagggagaga
gtcatgagtgaaacgggaacagagttgccaaaacaagagaaaaaacgtccaaaagcctcc
cagcaaccagaggagctggaagcaccgaagcagtttactccctttgattacagcaagtcc
aacttcaaagtgtttgcgggaagcagcaaatcgaagcagtcgccacaatttgatcctgcc
aagcaagcttacgcaggcaagaaatttgctggagctaacaaacttcaacagtctggaaac
cgaagcatgtcctacctggcggggaaagccgataggggttccaggcaccactggccaaag
agatag
DBGET
integrated database retrieval system
