Nipponia nippon (crested ibis): 104009111
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Entry
104009111 CDS
T05756
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04145
Phagosome
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104009111 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104009111 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104009111 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104009111 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104009111 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104009111 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
nni00536
]
104009111 (THBS4)
Membrane trafficking [BR:
nni04131
]
Endocytosis
Phagocytosis
Opsonins
104009111 (THBS4)
Exosome [BR:
nni04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104009111 (THBS4)
Exosomal proteins of colorectal cancer cells
104009111 (THBS4)
Exosomal proteins of bladder cancer cells
104009111 (THBS4)
Glycosaminoglycan binding proteins [BR:
nni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104009111 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
EGF_alliinase
DUF7630
Motif
Other DBs
NCBI-GeneID:
104009111
NCBI-ProteinID:
XP_009459337
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MVGVKPRRLLLCGDIHEEQWVFDLLPYSNKKVATNFLQQALGDPTVNEVYLLSTFKLQPK
STATIFGLYSSADNSKYFEFTVMGRVNKVVLRYLKSDGRLNSVIFSNIQLADGKPHAVIL
WLSGLQQGSSTVELYLDCLQVGAAQDLPKAFSALSQKSAAVELRTFLEKPQDTLDELKLV
TGGTLAQVGNLQDCFLQQIEPVPQYTGDFNRQLMGQIMQMNQILGDVKDLLRQQVKETTF
LRNTIAECQACGLGTVNFPTQLPRRSKPKCEVNSCFRGVRCMDTAEGFQCGPCPEGLTGN
GVTCSDIDECRYNPCFPGVRCVNTAPGFRCETCPPGYTGQTVQGIGLSYAKSNKQVCLDI
DECQNGGLGLCVPNSHCINTLGSYHCGQCKPGYTGDQTRGCQAERSCRNRALNPCSVHAR
CIEERRGEVTCICGIGWAGDGYICGKDVDIDGYPNEELPCSAENCRKDNCRFVPNSGQED
ADGDGIGNACDDDADGDGIPNEQDNCILAPNVNQRNGDQDIFGDACDNCRNVLNNDQRDT
DGDGKGDACDDDMDGDGIKNLLDNCQRIPNQDQEDKDNDGVGDACDSCPTISNPNQSDVD
NDLVGDSCDTNQDSDGDGHQDSTDNCPTIINSSQLDTDKDGLGDECDEDDDNDGIPDLLP
PGPDNCRLVPNPGQEDDNGDGVGDICESDFDQDTVIDRIDVCPENAEITLTDFRAYQTVV
LDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAG
FIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSLWHTG
DTSDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVADSGVTIDTTMR
GGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQFGVGDI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagtgaagccgaggcgtctcttgttgtgtggagacatacacgaagagcagtgg
gtttttgatctccttccctattccaacaagaaagtggcaacaaacttcttgcaacaagca
cttggtgatcctacggtgaatgaagtgtacttgctctcaacattcaaactgcagccgaag
agcacagccaccatatttggcctgtattcatcagctgacaacagcaagtattttgaattt
acagtaatgggacgggtgaataaagtggtgctgcgctatctgaagagcgacgggaggctg
aattcggtgatctttagcaacatccagctggctgatgggaaaccgcacgctgtcatcttg
tggctgagtggcctgcagcagggatcgagcacagtagagttgtatctggactgcctgcaa
gtaggtgctgctcaggacctgccaaaagcattttcagcactgtctcagaagtcggcggca
gtagagttgcgcactttcctggagaagccacaggatacgctagatgagctgaagctggta
actggaggaacacttgcccaagtggggaacctgcaggattgttttcttcaacaaattgaa
cctgttcctcagtacactggtgattttaataggcagctgatgggtcagataatgcagatg
aaccaaatactgggagatgtgaaagatcttctcagacaacaggtcaaagaaacaactttt
ctgagaaataccatagctgagtgccaagcatgtggtttgggaactgtgaattttccaact
cagcttcctaggcgcagtaaacccaaatgtgaagttaattcctgcttcaggggagtcagg
tgcatggatacagcagaaggatttcagtgcggcccttgccctgaagggctcacgggaaat
ggcgttacctgctcagatatcgatgagtgtcgttacaacccttgcttccctggagtgcga
tgtgtgaacactgctccaggtttccgatgtgagacctgtcccccaggatatacaggacaa
accgtgcaagggataggactcagctacgccaagagcaataaacaggtctgcttagatatt
gatgaatgtcagaatggtggacttggactctgcgttccaaattcccattgcataaacact
ttgggttcttaccactgtggccagtgcaaaccaggatatacaggagatcaaaccagggga
tgccaggctgagaggagctgcagaaatcgagccctcaatccatgcagtgtccatgcccgt
tgtattgaggagagaagaggagaggtgacatgtatttgtggcattggctgggctggtgat
ggttatatttgtggaaaagatgttgacattgatggctaccctaacgaggaacttccatgc
tctgctgaaaactgcagaaaggacaattgcagatttgtcccaaactctggacaagaagat
gccgatggtgacgggattggcaatgcctgtgatgacgatgcagatggagatggcattccc
aatgagcaggataactgtatcttggctcccaatgttaaccaaagaaatggtgaccaagat
atctttggagatgcttgtgacaactgccgcaacgtcctgaataatgaccagagggacaca
gatggtgatgggaaaggagatgcttgtgatgatgacatggatggagatggtattaagaac
cttttggataattgtcagaggatccccaaccaagaccaggaggacaaggataatgatggt
gttggtgatgcctgtgacagctgccctacaatcagcaacccaaaccagtcggatgttgac
aatgacctggttggagattcctgtgataccaatcaggacagtgacggcgatgggcaccag
gacagcacagacaactgccccaccatcattaacagctcccagctggacacggataaggat
gggttgggtgacgagtgtgatgaggatgatgataacgatggcatccctgacctcctgccc
ccaggccctgacaactgcaggctggttcccaacccagggcaggaagatgataatggtgat
ggagttggggatatctgtgagtctgattttgaccaggatacagtgattgatcggatcgat
gtgtgccctgagaacgcagaaatcaccttgacagacttcagggcctatcagacagtggtg
ctggacccagagggagatgcgcagattgatcccaactgggtggttctgaaccagggcatg
gaaattgtgcagactatgaacagtgatcctggccttgctgttggttacacagcttttaac
ggcgttgactttgagggcacttttcatgtgaacacggtgacagatgacgactatgctggc
tttatttttggttatcaagacagctctagcttttatgtggtaatgtggaaacagactgaa
cagacgtactggcaagcaactcccttcagagctgttgcagagcctggcattcagctaaag
gctgtgaaatccaagacaggacctggtgagcacctccgcaactccctctggcacacgggg
gacaccagtgaccaggtcaggctgctgtggaaggacccccgaaatgtagggtggaaggac
aaagtctcctaccgctggttcttgcagcacagaccccagatcggttatatcagggcaaga
ttttatgaaggctctgacctagtggcagactctggtgtaactatagacaccacgatgcgt
ggaggacggcttggagttttctgcttctctcaggaaaacattatttggtccaacctgaaa
taccgttgcaatgacaccatcccagaggactttcaagaatttcaagctcagcagtttggt
gttggtgatatttaa
DBGET
integrated database retrieval system
