Nipponia nippon (crested ibis): 104009116
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Entry
104009116 CDS
T05756
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04010
MAPK signaling pathway
nni04020
Calcium signaling pathway
nni04218
Cellular senescence
nni04260
Cardiac muscle contraction
nni04261
Adrenergic signaling in cardiomyocytes
nni04270
Vascular smooth muscle contraction
nni04530
Tight junction
nni04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104009116
04020 Calcium signaling pathway
104009116
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104009116
09144 Cellular community - eukaryotes
04530 Tight junction
104009116
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104009116
09153 Circulatory system
04260 Cardiac muscle contraction
104009116
04261 Adrenergic signaling in cardiomyocytes
104009116
04270 Vascular smooth muscle contraction
104009116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nni04040
]
104009116
Ion channels [BR:
nni04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104009116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
HemY_N
FAM176
Motif
Other DBs
NCBI-GeneID:
104009116
NCBI-ProteinID:
XP_009459343
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MQDAMGHELPWIYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLE
EDLRGYMDWITQAEDLEGDEDEHEKHRLTAEDLMGKRKPRLKWLRHASHSTETHGDAHRL
RRLNRLWRRRCRGAVKSVSFYWTVLLLVFLNTLTIASEHHGQPPWLTQTQAYANKALLSL
FAAEMVLKLYALGPARYFASFFNRFDCFVVCGGVLETALVERGAMEPLGISVLRCVRLLR
VFKVTRHWASLSNLVGSLLNSMKSIASLLLLLFLFIIIFALLGMQLFGGRFSFDETQTKR
STFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPVFPGMLVCVYFVILFICGNYILLN
VFLAIAVDNLADGDNINSGADKNLGGPRLEPLEEPPKTKVVPIPEGSAFFLLGSTNPLRV
RCHALIHHHVFTNLILVFIILSSVSLAAEDPVRAHSPRNHVGDWDELGXTGRYWGALGVL
LGVLGGYKEWHWEGHWECYWKALGALVSPDARGSSSAISVVKILRVLRVLRPLRAINRAK
GLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGEYECKCECRASPECECRGTF
LVYKDGDVAHPSVRERLWHNSDFNFDNVLAGMMALFTVSTFEGWPALLYKAIDANAEDQG
PIYNYRVEISIFFIIYIIVIAFFMMNIFVGFVIITFRAQGESEYRNCELDKNQRQCVEYA
LKAQPLRRDIPQNPSPERGGRGRRTRRGALTAPPRAQHYFCDAWNTFDALIVVGSVVDIA
VTEVNNGGHVGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSFQALPYV
ALLIAMIFFIYAVIGMQTFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ASLPGKRCDPESDAGELADEMACVRGL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcgatgggccacgagctgccctggatttacttcgtcagcctcgtcatcttc
ggctccttcttcgtcctcaacctggtgctgggggtgctgagcggggagttctccaaggag
cgggagaaggccaaggcccgcggagacttccagaagctgagggagaagcagcagctggag
gaggatctccggggctacatggactggatcacccaggccgaggacctggagggcgacgag
gacgagcacgagaaacaccgcctgaccgccgaggacctgatggggaagcggaaaccgcgg
ctgaagtggctccggcacgccagtcactccaccgaaacccacggtgacgcgcaccgcctg
cgccgcctgaaccgcctgtggcgccgacggtgccgcggggcggtgaaatccgtctccttc
tactggactgtcttactcctggtcttcctcaacaccctcaccatcgcctccgagcaccac
gggcagcccccttggctcacccaaacgcaagcctacgccaacaaggcgctgctgtcgctg
ttcgccgccgagatggtgttgaagctgtacgccctgggccccgcccggtacttcgccagt
tttttcaaccgcttcgattgttttgtggtgtgcggtggggtgttggaaacagctctggtg
gagcggggggcgatggaacccctggggatctccgtcctccgctgcgtccgcctcctccgc
gtcttcaaagtcaccaggcactgggcgtcgctgagcaacctggtgggctccctgttgaac
tccatgaagtccatcgcttccctcctcctcctcctcttcctcttcatcatcatcttcgcc
ctgctgggcatgcagctcttcgggggccgcttcagcttcgacgagacccagaccaagcgc
agcaccttcgataccttccctcaggcgctgctcaccgtcttccagatcctgacgggggag
gactggaacgcggtgatgtacgacgggatcatggcctacggcggccccgtcttccccggg
atgctcgtttgcgtctactttgtcatcctcttcatctgtgggaactacatcctcctcaac
gtcttcttggccatcgcggtcgacaacctggccgacggcgacaacatcaactcgggggcc
gataaaaatctgggggggccccggctggagcccctggaggagccccccaaaaccaaggtg
gtgccgatccccgagggcagcgccttcttcctgctgggcagcaccaacccgctgcgggtg
cggtgccacgccctcatccaccaccacgtcttcaccaacctcatcctcgtcttcatcatc
ctcagcagcgtctcgctggccgccgaggaccccgtccgcgcccactccccccgcaaccac
gtgggagactgggatgaactgggatgaactgggaggtactggggggcactgggagtgctg
ctgggcgtactgggaggctacaaggaatggcactgggaagggcactgggagtgctactgg
aaggcactgggagcactggtgtcccccgacgcccgcggcagctccagcgccatctcggtg
gtgaagatcctgcgggtcctgcgcgtcctgcggcccctgcgagccatcaaccgcgccaag
ggcctcaagcacgtggtgcagtgcgtcttcgtggccatccgcaccatcggcaacatcatg
atcgtcaccacgctgctgcagttcatgttcgcctgtatcggggtgcagctcttcaagggt
gagtatgagtgtaaatgtgagtgtagggcgagtcccgagtgtgagtgtaggggcaccttc
ctggtgtacaaggacggggacgtcgcccacccctcggtgcgggagcgcctgtggcacaac
agcgacttcaacttcgacaacgtgctggcggggatgatggcgctcttcaccgtctccacc
ttcgagggctggcccgcgctgctgtacaaggccatcgacgccaacgccgaggaccagggt
cccatctacaactaccgggtggagatctccatcttcttcatcatctacatcatcgtcatc
gccttcttcatgatgaacatcttcgtcggcttcgtcatcatcaccttccgggcgcagggg
gagagcgagtaccgcaactgcgagctggacaagaaccagcggcagtgcgtggagtacgcc
ctgaaggcgcagccgttgcggcgggacatcccccagaaccccagcccggaacgcggaggg
cgggggcgtcgcacgaggaggggggccctcaccgccccgccccgcgcgcagcactacttc
tgcgacgcctggaataccttcgacgccctcatcgtggtgggcagcgtggtggacatcgcc
gtcaccgaggtcaacaacgggggtcacgttggtgagagctcggaggacagctcccgtatc
tccatcacttttttccggctcttccgggtgatgcggttggtgaagctgctgtccaagggc
gagggtatccgcaccctgctctggaccttcgtcaagtccttccaggccctgccctacgtc
gccctcctcatcgccatgatcttcttcatctacgccgtcatcggcatgcagacttttggg
aaggtggcgctgcaggacgggacccagatcaaccgcaacaacaacttccagaccttcccc
caggccgtgctgctgctcttcaggtgcgccacgggggaggcctggcaggagatcatgctg
gccagcctgccgggcaagcgctgcgaccccgagtcggacgcgggggagctggccgacgag
atggcctgcgtgcgcgggctgtag
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