Nipponia nippon (crested ibis): 104009524
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Entry
104009524 CDS
T05756
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104009524 (CTR9)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104009524 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_6
TPR_7
TPR_11
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104009524
NCBI-ProteinID:
XP_009459804
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLERALVGLAVLELNNKEADSIKNGVQL
LSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESCYQLARSFH
VQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYET
MKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTA
TRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISV
TTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEA
LQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQ
PTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREAT
ADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECK
QTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLS
KVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLL
KEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKEKKRGGGGGRRSKKGAGE
FDEFVNDDSDEDLPMSRKKKKRKGSGSEQDGEEEEGERKKKKRRRPQKADEGSDDEEHEN
GPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADDGHARNS
NSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVRPSEEDSDSDRSARKRRRSDS
EQSDNESVQSGRSRSGGSENESRPASRSADSDRDSERGSDNEGSGRGSGNESEPEGSNDE
GSEGGSDDSD
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggggtctattgagatccctctccgggacaccgatgaggttattgagcttgac
ttcgatcagttacctgaaggtgatgaagttataagtatactgaaacaggaacacactcaa
ctgcacatatggattgccttagcgctggaatactacaagcaagggaaaacagaagacttt
gtgaagctgttggaagctgcacgcatagatggtaacttggactatagagaccatgaaaaa
gatcagatgacatgtctggatactctggcagcatactatgtacagcaggctcgaaaggag
aagaacaaagataacaagaaggagctcattacacaagctaccttgttgtatactatggct
gacaaaattatcatgtatgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggaccaagctgatgcgcaattccattttgtgctcaaccagtctcca
aataatattcctgcccttctcggtaaagcatgcatttctttcaacaagaaagattataga
ggcgcccttgcctactacaagaaagcattgcgtaccaatccaggttgcccagctgaggtt
cgattaggtatgggccactgcttcgtgaaactgaacaagttggaaagggctttggttgga
ctggctgttctagaactcaataataaagaggctgattccatcaagaatggtgttcaactc
ctgtcaagggcttacacaattgatcccagtaatccaatggtattgaatcacttggctaat
cacttcttcttcaagaaggactatggtaaagtacaacatttggctcttcatgctttccat
aacacagaagttgaagcaatgcaggcagagagttgttatcagctggctaggtcttttcat
gtacaggaagattatgatcaagctttccagtattattaccaggccactcagtttgcctca
tcttcttttgtacttccattttttggactgggtcaaatgtacatttatcgaggggacaaa
gagaatgcatcacaatgctttgaaaaagttttgaaagcctatcctaacaattatgagact
atgaaaattcttggatctctttatgcggcttcagaagaccaggagaagcgggatattgcg
aagggacatctaaagaaagtcacagaacaatatcctgatgatgtagaggcgtggattgag
ctagcccaaattctagaacagactgatatacagggtgcattgtcagcctatggtacggcc
acacgcattctgcaagagaaagtacaggctgatgtcccaccagagattttgaataatgtg
ggtgctctgcacttcaggctgggaaacctaggagaagcaaagaaatattttttggcatca
ctggatcgtgcaaaagcagaagctgaacatgatgagcattattacaatgctatctctgta
acaacgtcctataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcggaa
aagctgtataaaaacattttaagagaacatcctaattacgttgattgctacttgcgcttg
ggagctatggctagggataaaggaaatttttatgaggcttctgattggtttaaagaagca
cttcagataaatcaggaccatccggatgcttggtctctgattggcaatcttcatttggct
aaacaagagtggggtccaggacagaagaaatttgaaagaatattgaaacagccctccaca
caaaatgatacttattctatgctggctcttggcaacgtctggttgcagactctacatcaa
cccacaagagacagagaaaaggagaagcgtcatcaagaccgtgcattagcaatctacaag
caagtcctcagaaatgatccaaagaatttgtatgctgctaatggcataggagctgtcttg
gcacataaaggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaaca
gcagatatcagtgatgtgtggctgaatttggcacatatctacgtagaacagaaacaatac
atcagtgctgtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaatact
gaagtattgttatatttggcccgggcgctcttcaaatgtggcaaattacaggaatgcaaa
caaactttgttaaaggccaggcatgtagcaccaagtgatacagtccttatgtttaatgtg
gctttagtgctacaaagactagctacctctgtcctgaaagatgaaaaaagcaatctaaag
gaggtgcttaatgctgtgaaagaactggagctagcccacaggtacttcagttacttgagt
aaagtaggtgataagatgagatttgacttggcacttgctgctacagaagccaggcaatgc
tctgacttactgagtcaagcccagtatcacgtggctcgggcacgcaagcaggatgaagaa
gaaagggagctgcgtgcgaagcaagagcaagaaaaggagctgcttcgccaaaaactactt
aaagaacaggaagagaagcgcctaagagaaaaagaagaacagaagaaacttctggaacaa
agagctcaatatgtggagaaaaccaagaatattctgatgttcactggtgaagtagaagga
tcaaaggagaaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggag
tttgacgagttcgtcaatgatgacagtgatgaagatctgcccatgtctagaaagaaaaag
aagaggaagggcagtggtagtgaacaagatggggaagaagaggagggtgagagaaagaag
aagaagaggaggagaccccagaaggcagatgaggggagcgatgatgaagaacatgaaaat
ggtccaagacctaaaaaacgacgtccacctaaagcagagaaaaagaaggctcccaaacca
gaacgtctgcctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagt
gatgattcttctgatgaggataaactcaaaattgctgatgatggacatgctaggaatagc
aacagtgattcagatgatggggaacagcagcacagtaaacgcattgtttctgatagtgat
tctgataacagaaacaaatctggtagcgaggcaggtagtccaaggaggtccagtgtccgc
ccatctgaggaagattctgacagtgacaggtcagctagaaaaaggaggcggtcagattcg
gagcagtctgacaatgagtctgtacagtcggggagaagtcgttccggtggttcagaaaat
gaatctcgcccagcttctcgtagtgctgactcagacagagattctgagagaggatctgac
aacgagggttctggcagaggctctggtaacgaatctgaaccagaaggatccaacgatgag
gggtctgagggtggctcagatgacagtgattag
DBGET
integrated database retrieval system
