KEGG   Nipponia nippon (crested ibis): 104009596
Entry
104009596         CDS       T05756                                 
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104009596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nni03021]
    104009596
Transcription machinery [BR:nni03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     104009596
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 104009596
NCBI-ProteinID: XP_009459883
LinkDB
Position
Unknown
AA seq 615 aa
MAAKVPQALRCNEGKRRVLVHGEGPEGKRCHAEGTEAQQNAEGGAQDDEDGEGEDDAEVQ
QECLKKFSTPDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQT
GVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAE
AHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNL
PEFAKMVCHGEHTYLFAQSMMSILAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALG
TAASYPRACQALGAMLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKP
GAKINQDHKHKYIHILAYAASVVEMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGA
SELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQL
LHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLD
TDISLIRYFVTEVLDVIAPPYTSDFVQLFLPXXXXXXXXPILENESIAGTIKTEGEHDPV
TEFIAHCKSNFIMMN
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggcagcaaaagtgcctcaggctctgaggtgcaatgaaggcaaaaggagggttctggtg
cacggcgaaggtcctgaggggaaaagatgccacgcagagggcactgaggcacagcaaaat
gcagaaggaggggcccaagatgatgaagatggagagggagaagatgatgctgaagtccag
caagaatgcctgaagaagttttcaaccccagactatataatggagccgtctatctttaac
acgttaaagaggtatttccaagcaggaggttctccagagaatgttatccagctcctctct
gaaaactacacggcagtggcacagactgtaaatttgctggcagagtggctcattcaaaca
ggtgttgagccagtgcaagttcaggagactgtagaaaaccatttaaagagcttacttatc
aagcattttgaccctcggaaagcagattccatctttacagaggaaggagagactccagcc
tggcttgagcaaatgatagcacacactacgtggagagatctcttttacaagttggcagaa
gcccatcccgactgtttaatgcttaattttactgtgaagcttatatctgatgctggatat
caaggggaaataaccagtgtttcaacagcatgtcagcaactagaagtattttccagagtc
ctgcgtacatctctggcaacaattttagatggaggagaagaaaaccttgaaaaaaacctc
cctgagtttgctaagatggtgtgccatggagaacacacttacctttttgctcaatctatg
atgtccatattagctcaagaagagcaaggagggtcagctgtcagacggattgctcaggag
gttcagcgatatgctcatgagaaaggccatgatgccagtcagatcactttagcgttgggt
actgcagcctcctatcctcgagcgtgtcaggctcttggtgcgatgttgtccaaaggagct
ctgaatccagcagatatcactgtcctgttcaaaatgtttacaagcatggacccacctcca
gtagaactgattcgagtacctgcctttctggacctcttcatgcagtcattgtttaagcca
ggtgctaagatcaaccaggaccacaaacataaatatattcacatactggcatatgcagct
agtgtagtagagatgtggaaaaagaacaagagagtcagcataaacaaggatgaactcaag
tcaacttcaaaagccattgaaactgttcacaatctgtgctgcaatgagaacaaaggagca
tcagagttggttgcagaactgagcactctttatcagtgcatcaggttcccagtggtggca
atgggtgtattaaagtgggtggattggacagtgtcagaaccacgatacttccagctgcag
actgatcacactccggttcatctggcattattggatgagatcagtacatgccatcagctg
cttcatccccaagttctgcaacttcttgtcaagctcttcgaaacagaacattcgcagctt
gatgtaatggagcagctggagttgaagaagactctcctggatagaatggtgcacttactc
agccgaggatatgtcctgcctgttgtcagctatatccgcaaatgcctggagaagctagat
acagatatctctctcatcagatattttgttacagaggtgctggatgtgattgctcctcca
tatacctcagactttgtacagctttttcttccgnnnnnnnnnnnnnnnnnnnnnnnnccg
atcttggagaatgaaagtattgcaggtactattaaaacagaaggcgaacatgatcctgtc
actgagtttatagctcattgcaaatctaactttattatgatgaactaa

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