Nipponia nippon (crested ibis): 104009611
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Entry
104009611 CDS
T05756
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104009611 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104009611 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104009611 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nni00535
]
104009611 (COL9A3)
Proteoglycans [BR:
nni00535
]
Extracellular matrix (ECM) proteoglycans
Others
104009611 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104009611
NCBI-ProteinID:
XP_009459897
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAGFSPLGVLFLCQLLATASAQRVGPQGPPGPRGPPGPSGKDGIDVSAVRQRAGSAEGGR
GVEQRQSQLSREAALVLQRHSLWAILQRWMDLENQPTRKRPPSARGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTRTDGPPGPNGPPGDRGALGPAGPPGPAGPPGPSGLP
GGNGFRGAPGPFGLPGFPGPPGPPGPPGLPGTLPDGGGDLQCPALCPPGPPGPPGMPGFK
GHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRGDIGFR
GPPGIPGPPGKAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPGKDGRDGAP
GLDGEKGDAARMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDV
GIPGERGLPGPRGATGPLGLQGPMGAPGVRGFQGPKGASGEPGLPGPTGIRGELGDRGPA
GVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNGTAGVPGIP
GHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANLRKPLSPGM
TGRPGPAGPPGPPGAPGSVGHPGPRGPPGYRGPTGELGDPGPRGDAGEKGDKGPVGQGID
GPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGICDTSACMGAVG
ASTSKKS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctcccctcttggggttctcttcctatgtcagctcttagccacagcatca
gctcagagagtaggaccacaaggccctcctggaccacgaggaccccctggaccatctggc
aaggacggcatagatgtgagtgccgtacggcagagggcaggctcggccgagggagggcga
ggggtggagcagaggcagagccaactgagcagagaagctgctcttgttctccagcgccac
agcctttgggccatccttcagaggtggatggacctggagaaccagcctactcgcaagaga
cctccttctgcaagaggagagccgggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagccggattgcctggccttcctggagtg
gatggtttaacaagaaccgatggcccacctggcccaaatgggcctccaggggaccgtggt
gcattaggacctgccgggccacctggaccagctgggcctccaggacccagtgggctccca
ggtggaaatggatttcggggtgctcctggaccttttggtctgccaggattcccagggcct
cctggaccacccggacctcccggtcttccaggcacccttcctgatggcggtggggacctt
cagtgcccggctctgtgcccaccgggtcctccgggtcccccnggaatgccagggttcaag
ggacacaccggtcacaaaggagaacctggtgagataggaaaagaaggagaaaagggcaac
cctggtcctcccggtcctccgggcattccgggcagcgttggcctgcagggcccaagagga
ctaagaggcctccctggtccaatgggtccggcaggcgacagaggtgacatcggtttcaga
gggccgcctggaatcccaggacctccagggaaagctggagaccaaggaaacaaaggacct
caaggattcagggggcccaaaggcgatactggtagacctggaccaaaaggaaacccaggg
gctcgtggactcataggagaacctggcatgcctggcaaggatggacgggatggagctcct
ggactcgatggtgagaagggtgacgcagctcgcatgggtgctcctggagagaaggggcca
aacggactgcctggactgcctggaagagcaggtattaaaggctcaaagggtgaaccaggc
agtcctggagagatgggagaggcgggtccctcgggagaaccaggcatccccggcgacgtt
ggtattcctggtgagagaggcctgccgggacccagaggagcaactggcccgcttggtctt
caaggcccgatgggagcccccggtgtcagaggtttccagggtcccaaaggtgccagtggg
gagcctggccttcctggtccaacgggaattcgtggagagttaggtgacaggggtcctgct
ggtgttcctggtcccaaaggtaaccagggcattgctggagcagatggcctcccaggtgac
aaaggagaactgggtccctttggtccccccggccaaaaaggagagccaggaaaaagggga
gaacttggtccaaaaggtgtccaaggacccaatgggacagctggagtaccagggatccca
ggacacccggggcccatgggccatcagggggagcaaggcgttcccggcatcacgggaaaa
cctgggcctcctggcaaagaggccagcgaacaacatataagagagctctgcggggaaatg
ataaatgatcaaattgcgcagttagctgctaacctgagaaagcccttgtctccgggaatg
acgggtcgtccgggcccagctgggcccccgggtcctcccggagctccgggaagcgtcggg
catcctggtcctcgtggtccccctggatacagggggccaacaggagaactcggtgatcct
ggtcccagaggtgacgccggcgagaagggagataagggacctgttgggcagggtattgat
gggcctgacggcgatcaaggacttcaaggaccgcctggtgtacctggaattactaaaaat
ggtcgcgatggtgctcagggtgaacccggtcttccaggggatcccggtactcctggtgct
gttggggctcagggaactccaggaatatgtgacacgtcggcttgcatgggagctgttgga
gcatcaacttccaaaaaatcatag
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