KEGG   Nipponia nippon (crested ibis): 104009611
Entry
104009611         CDS       T05756                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni04510  Focal adhesion
nni04512  ECM-receptor interaction
nni04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nni00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104009611 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104009611 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104009611 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:nni00535]
    104009611 (COL9A3)
Proteoglycans [BR:nni00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   104009611 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 104009611
NCBI-ProteinID: XP_009459897
LinkDB
Position
Unknown
AA seq 727 aa
MAGFSPLGVLFLCQLLATASAQRVGPQGPPGPRGPPGPSGKDGIDVSAVRQRAGSAEGGR
GVEQRQSQLSREAALVLQRHSLWAILQRWMDLENQPTRKRPPSARGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTRTDGPPGPNGPPGDRGALGPAGPPGPAGPPGPSGLP
GGNGFRGAPGPFGLPGFPGPPGPPGPPGLPGTLPDGGGDLQCPALCPPGPPGPPGMPGFK
GHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRGDIGFR
GPPGIPGPPGKAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPGKDGRDGAP
GLDGEKGDAARMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSGEPGIPGDV
GIPGERGLPGPRGATGPLGLQGPMGAPGVRGFQGPKGASGEPGLPGPTGIRGELGDRGPA
GVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNGTAGVPGIP
GHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANLRKPLSPGM
TGRPGPAGPPGPPGAPGSVGHPGPRGPPGYRGPTGELGDPGPRGDAGEKGDKGPVGQGID
GPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGTPGAVGAQGTPGICDTSACMGAVG
ASTSKKS
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggctggattctcccctcttggggttctcttcctatgtcagctcttagccacagcatca
gctcagagagtaggaccacaaggccctcctggaccacgaggaccccctggaccatctggc
aaggacggcatagatgtgagtgccgtacggcagagggcaggctcggccgagggagggcga
ggggtggagcagaggcagagccaactgagcagagaagctgctcttgttctccagcgccac
agcctttgggccatccttcagaggtggatggacctggagaaccagcctactcgcaagaga
cctccttctgcaagaggagagccgggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagccggattgcctggccttcctggagtg
gatggtttaacaagaaccgatggcccacctggcccaaatgggcctccaggggaccgtggt
gcattaggacctgccgggccacctggaccagctgggcctccaggacccagtgggctccca
ggtggaaatggatttcggggtgctcctggaccttttggtctgccaggattcccagggcct
cctggaccacccggacctcccggtcttccaggcacccttcctgatggcggtggggacctt
cagtgcccggctctgtgcccaccgggtcctccgggtcccccnggaatgccagggttcaag
ggacacaccggtcacaaaggagaacctggtgagataggaaaagaaggagaaaagggcaac
cctggtcctcccggtcctccgggcattccgggcagcgttggcctgcagggcccaagagga
ctaagaggcctccctggtccaatgggtccggcaggcgacagaggtgacatcggtttcaga
gggccgcctggaatcccaggacctccagggaaagctggagaccaaggaaacaaaggacct
caaggattcagggggcccaaaggcgatactggtagacctggaccaaaaggaaacccaggg
gctcgtggactcataggagaacctggcatgcctggcaaggatggacgggatggagctcct
ggactcgatggtgagaagggtgacgcagctcgcatgggtgctcctggagagaaggggcca
aacggactgcctggactgcctggaagagcaggtattaaaggctcaaagggtgaaccaggc
agtcctggagagatgggagaggcgggtccctcgggagaaccaggcatccccggcgacgtt
ggtattcctggtgagagaggcctgccgggacccagaggagcaactggcccgcttggtctt
caaggcccgatgggagcccccggtgtcagaggtttccagggtcccaaaggtgccagtggg
gagcctggccttcctggtccaacgggaattcgtggagagttaggtgacaggggtcctgct
ggtgttcctggtcccaaaggtaaccagggcattgctggagcagatggcctcccaggtgac
aaaggagaactgggtccctttggtccccccggccaaaaaggagagccaggaaaaagggga
gaacttggtccaaaaggtgtccaaggacccaatgggacagctggagtaccagggatccca
ggacacccggggcccatgggccatcagggggagcaaggcgttcccggcatcacgggaaaa
cctgggcctcctggcaaagaggccagcgaacaacatataagagagctctgcggggaaatg
ataaatgatcaaattgcgcagttagctgctaacctgagaaagcccttgtctccgggaatg
acgggtcgtccgggcccagctgggcccccgggtcctcccggagctccgggaagcgtcggg
catcctggtcctcgtggtccccctggatacagggggccaacaggagaactcggtgatcct
ggtcccagaggtgacgccggcgagaagggagataagggacctgttgggcagggtattgat
gggcctgacggcgatcaaggacttcaaggaccgcctggtgtacctggaattactaaaaat
ggtcgcgatggtgctcagggtgaacccggtcttccaggggatcccggtactcctggtgct
gttggggctcagggaactccaggaatatgtgacacgtcggcttgcatgggagctgttgga
gcatcaacttccaaaaaatcatag

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