Nipponia nippon (crested ibis): 104009715
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Entry
104009715 CDS
T05756
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04142
Lysosome
nni04144
Endocytosis
nni05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104009715 (CLTCL1)
04142 Lysosome
104009715 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104009715 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104009715 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nni04147
]
104009715 (CLTCL1)
Membrane trafficking [BR:
nni04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104009715 (CLTCL1)
Exosome [BR:
nni04147
]
Exosomal proteins
Proteins found in most exosomes
104009715 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
104009715
NCBI-ProteinID:
XP_009460004
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
IKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLQKDLVKEAIDSYIKADDPSTYMEVVQAANRNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLAST
LVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYY
QDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQF
YLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNRLLLVKPYLRSVQNHNNKGVNEALNNL
LTEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKK
DRLYKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHN
IMDFAMPYFIQVMREYLTKVDKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQ
ANFPYGYTAPGFTQPPVYGFNM
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgtatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgagcgatccaacaacacccatcagacgtccaatttctgccgaaagtgcc
atcatgaatccagcctctaaagtaattgccctaaaagatgctgggaaaacacttcagatc
tttaacattgagatgaaaagtaaaatgaaagcccacacgatggcagaggaagtgatcttc
tggaaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactgg
agcatggagggagaatcgcaaccccagaagatgtttgacaggcatgctagtcttgcaggc
tgccaaatcatcaattacagaacagatgaacaccaaaaatggctgctgctgataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgatagaaaagtc
tcccaacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgcc
aaaccttctaccctcttctgttttgctgtgaggagtcctgcagggggcaagctacacata
attgaagtaggtcagccagctactggaaatcaaccatttgttaagaaagctgttgatgtg
tttttcccacctgaagcacagacagactttcctgtggcaatgcagattggaattaagcat
ggtgttatctacctgatcacaaagtatggatatattcacatgtatgacttggagtctgga
gtgtgcatctacatgaatcgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgag
gaagacaacatagtgaactatgctacgaatgttctccagaatcctgacttgggactgcgt
atggctatacgtagtaacctagctggggcagaggaattatttgccaggaagttcaatacg
ctatttgctcaaggaagctatgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagcgatacaatcaggaagttccagagtgtaccagctcagcctgggcag
gcctctcccctgctccagtactttggaatattgcttgaccagggacagctgaacaagttt
gagtctctggagctctgtcgccctgtcctacagcagggccgcaagcagcttctggagaag
tggctgaaagaagacaagctggagtgctcagaggagctgggagacttggtgaagacagct
gacccaacccttgcactcagtgtctatcttcgtgccaatgtgccaaacaaagtgattcag
tgctttgctgaaactggtcagttccagaaaatagtgctgtatgctaaaaaggttggctat
accccagactggatcttcttactgagaagtgtgatgagagtcagtccagagcaaggcctg
cagttctctcagatgctggtacaggatgaggagccgctggctaacattaaccagattgtg
gatgtgttcatggagaatagtcttattcagcagtgcacgtcctttctgttggatgccttg
aaaaataatcgccctgcagaaggccaccttcagactcgtctcctggaaatgaatttgatt
catgccccgcaggttgcagatgccattcttggaaaccaaatgtttacacactatgatcgt
gctcatattgcccagttgtgtgaaaaggcagggttgctccagcgagctttggaacactac
acggatctctatgatattaaacgtgctgtcgttcatactcacctcttgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactccgtggagtgtttgcgtgccatg
ctgtcagccaacattaggcaaaacctacagctctgtgtgcaagttgcttctaaataccat
gagcagcttggtacccagtctcttgtggagctttttgaatctttcaaaagctatgaagga
ctgttctatttcttgggttccattgtaaacttcagccaggatccagacgttcacttcaag
tacatccaggcagcttgcaagactggtcagataaaggaagtggaaagaatctgccgtgaa
agtaactgctataacccagaacgggtgaagaactttctgaaggaagcaaagctcacggac
cagcttcctctgatcattgtctgtgatcgatttgactttgtccatgacctggtgctctac
ttatatcgcaataacctgcagaagtatatagagatctatgtacagaaggtgaatcctagc
cgtataccagcagtggttggaggacttcttgatgtggattgttctgaagatgtcattaag
aacttgatcatggtggttagaggccagttctcaacagatgagctggtggctgaagtggaa
aaaagaaatcggcttaagttgctgttgccatggcttgaatcaaggattcatgaaggctgt
gaagaacctgcgactcataatgccttggccaaaatctacattgacagtaataataatccg
gagcggttccttcgtgagaatccttactatgacagccgtgtagttggcaaatattgtgaa
aagagggaccctcatctggcctgcgttgcttatgagaggggtcaatgtgatctggaactc
ataaaggtctgcaatgagaactcgctgtttaagagtgaggctcgctatctggtgcgcagg
aaggaccctgagctctgggcaaatgttctggaagaaaacaacccattcaggcggcagctt
attgaccaggttgtccaaacagctttatcagagacacaggatccagaggaggtttctgta
actgtgaaagctttcatgactgctgacctgcctaatgaattgattgagttattggaaaaa
attgtcttggataattctgtattcagtgaacacaggaatctccagaatctgctgatcctg
actgccattaaggctgaccgcactcgtgtgatggaatacatcaatcgtctagataactat
gatgccccagatattgcaaacattgccatcagtaatgagctatatgaagaagcctttgct
atattcagaaaatttgatgttaatacttcagcaattcaggtgctgattgagcacattggc
aacttagaccgtgcttatgaatttgccgagagatgtaacgaaccagcagtatggagccag
ctagccagggcacagctccagaaggacttggtgaaagaagccattgattcctatataaag
gcagatgatccatctacctacatggaggttgttcaagcagctaatagaaatgataactgg
gaggaccttgtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagag
acagaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttatt
agtggccctaataatgcccatatacaacaggttggtgatcgttgttatgaagaggggatg
tatgaagcggcaaaactactctataacaacgtatctaactttgctcgcctggcatctacc
ttggtgcaccttggagagtatcaggcagcagtggacagtggccgcaaagccaacagcaca
aggacttggaaggaggtatgctttgcctgcgtggatggaaaagaattccgcttggcacag
atctgtggtttacacatagtcatccacgctgatgaacttgaggagctgatcagttactat
caggatcgtggatactttgaagaactgattgcccttttggaagctgctttgggcctagag
cgtgctcacatgggaatgtttactgaacttgctatcttatactccaaattcaagcctcag
aaaatgagggaacatctggagctcttctggtctagagttaatattccaaaggtgctcaga
gctgcagaacaggctcatctctgggcggaacttgtattcctctatgacaagtatgaggag
tatgacaatgcaataattactatgatgaatcatcccactgatgcctggaaagaggggcag
tttaaagacataattgccaaggtggccaatgtggagctatactataaagccttgcaattc
tatttagactacaaacctctgctgatcaatgatctcctgcttgtattatctccacgactg
gatcacaccaggacagtcaattttttctcaaaggtgaatcggctacttctagtaaagcct
tatctgcgttcagtccagaaccacaacaacaaaggagttaacgaagctctgaacaacctt
ttaacggaggaggaagattaccagggtttgagagcttccattgatgcctatgacaacttt
gataacataacgctggctcagcgtctggaaaagcatgaactaattgaatttaggcgtatt
gcagcatacttgtataagggtaacaaccgctggaaacagagtgtggagctatgcaagaaa
gaccgtctgtataaggatgctatgcagtatgctgcggagtccaaagatgcagaactagct
gagaagctgcttcagtggttcctggaagaaggcaagcaggagtgctttgcagcctgcctt
ttcacatgttacgacttgctacacccagatgtagtccttgagttggcatggaggcataac
atcatggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtg
gataaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccact
ccaatagtatttggccagcagttgatgttaacagcaggccccagtgcagtacctccccag
gcaaacttcccatatggatacacagcaccaggattcacccagccgcctgtttatggtttc
aatatgtaa
DBGET
integrated database retrieval system
