Nipponia nippon (crested ibis): 104010140
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Entry
104010140 CDS
T05756
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04137
Mitophagy - animal
nni04140
Autophagy - animal
nni04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104010140 (HIF1A)
04137 Mitophagy - animal
104010140 (HIF1A)
04148 Efferocytosis
104010140 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104010140 (HIF1A)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104010140 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HIF-1a_CTAD
PAS_3
PAS_11
HIF-1
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
104010140
NCBI-ProteinID:
XP_009460489
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All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
ITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVE
TQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDIKITKIFSKD
DLDDTNNLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSS
EKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMPQVQEQPTS
PSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLE
MLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQTQTPSSTADEIKPVTERVD
DVKMLIIPSSPVHIISETSSAPASPYGGNRSRTASPIRAGKGTLDQTEKSCPGAPSLLTV
TLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGNASLAWK
RVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLL
QGEELLRALDQVN
NT seq
1663 nt
NT seq
+upstream
nt +downstream
nt
aattacagagttgatggggtatgagccagaggaactcctgggtcgctcaatctacgagta
ctaccacgcgctggattccgatcatctgaccaaaacgcaccacgatatgttcacaaaagg
gcaggtgacaacaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttga
aactcaagcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgcgt
gaactacgtgctgagtggaattgttcaaaaggacttgattttttcccttggacaaactga
gtgtatgctgaaaccagtggagtctcccgatataaaaatcaccaaaatattcagcaaaga
tgacctggatgataccaacaacctttttgaaaaacttaaacaggaaccagatgctttaac
tgtgctggccccagctgccggagacacaattatctctctagatttcagcagtaatgagtc
tgatgaacaacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccag
tgagaaattacagaatataaatatggcaatgtccccactacctgcctctgaaactacaaa
gccacttcgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagcc
aaacacagagccacttgaactttcttttaccatgcctcaggtgcaagagcaaccaaccag
cccttctgatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactg
ctttgatgtggataatgatatggctaatgaattcaaactggaattagtggagaaactctt
tgcaatagatacagaagcaaaaaacccattctctactcaggaaaccgatttagatttgga
gatgttggctccttacatcccaatggatgatgacttccagttgcggtcctttgatcagct
atctccgctggaaagcagttcttccggctctcaaaatgcagccaccattaccatatttca
gcagactcagacaccatcaagtaccgctgatgaaataaaaccagtgacagagcgtgtgga
tgacgtgaagatgctaatcattccttcatctcctgtgcacataatcagtgaaacgagtag
tgccccagcatcaccttacggtgggaacaggagtcgaactgcatctccgatcagagcagg
aaaaggaacgttggatcagacggaaaaatcttgtccaggagcgcccagtttgctaacagt
cactctgaataaaagatctactgcaatggatgaagaactaaatccaaagatgctagcttt
gcataatgctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttgg
aattgggtctttattccagcagacaggtgaccgcggaggaaatgcatcacttgcttggaa
acgtgtaaagggatgcaaaacaaatggtcataatggagtggagcaaaagacaatcattct
actatcaactgacatagcgagtaaacttctagggcagtcgatggatgaaagtggactgcc
ccaactcacgagttacgattgcgaagtaaacgctcccatacaaggcaacagaaacctgct
acagggtgaagaactgctcagagctctggatcaagttaactga
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