Nipponia nippon (crested ibis): 104010304
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Entry
104010304 CDS
T05756
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04140
Autophagy - animal
nni04148
Efferocytosis
nni05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104010304 (VPS41)
04148 Efferocytosis
104010304 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104010304 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nni04131
]
104010304 (VPS41)
Membrane trafficking [BR:
nni04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104010304 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
zf_RING_Vps8_fungal
WD40_CDC20-Fz
WD40_Prp19
Vps39_1
zf_RING_Vps8
ANAPC4_WD40
TPR_PEP5_VPS11
Beta-prop_EML_2
zf-RING_5
Beta-prop_HPS5
WD40_WDHD1_1st
zf-RING_11
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104010304
NCBI-ProteinID:
XP_009460680
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MTVHEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQV
FGLYSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEG
EGNIRNVKWRGHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTL
IIGWGNSVKICSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEI
SEKTEVECCARPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIIS
PRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGE
HDLAARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLE
SDYEGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLQTLAELYTYDQRYGRALEI
YLTLRHKDVFQLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENR
PELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQR
NFVEETVYLLSRMGNSRSALKMIMEELQDVDKAIDFAKEQDDGELWEDLILYSIDKPPFI
TGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLS
LLKKMHRTQMKGVLVDEENICESCLSPILPSDASKSFNVVVFHCRHMFHKECLPVSNTVS
PVQFCNICSAKHRGPGSAILEMKK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcatgaaaagtttttggcactgggaacgcattatggcaaagtgtatttactt
gatgtccaggggaacatcacacagaagttcgatgttagtccagtgaagataaatcagatc
agcctggatgaaagtggagaacacatgggtgtttgctcagaagatggcaaggtgcaggtg
tttggattgtattcagcggaagagtttcatgaaacgtttgactgtcctattaaaattgtt
gctgttcatcctcattttgtaagatcccacttcaagcaatttgtaacaggagggaaaaag
ttgctgttatatgagagaggctggatgaatagatggaagccttcagttttacatgaaggg
gaaggaaatataagaaatgtaaaatggagaggacacttaatcgcttgggccaataatatg
ggcgtgaaaatactcgacatgatctccaagcaaagaattaccaatgtgcctcgagatgac
ataagccttcgcccagatatgtatccctgcagcctttgctggaaggataatttaacgctg
attattggctggggaaattcagtaaagatttgctcagtaaaagaacggcatgccagtgaa
atgcgtgaccttccaaaccgctatgtggaaatagttttccagttcgacaccgaattctat
ataagcggacttgctcctctctgcgaccagcttgttatactttcttatgtaaaggagatt
tctgaaaaaacggaagtggagtgttgtgcaaggcctagactggatattgtacaaccccta
cctgagtcctgtgaagagatctcttctgatgcgctcacagtacgaggatttcaggaaaat
gaatgtagagattatcatttagagtattcagaaggtgaatcgcttttttatatcatcagc
ccaagagacgtggtcgtggctaaagagcgggaccaagatgaccacattgactggcttctt
gaaaagaagaaatacgaagaagctttgatggcagctgagataagtcagaaaaccataaaa
aagcacaagattttggacattggcttagcctatataaatcacctagtggagaaaggagag
catgacctggctgctcgaaagtgccagaaaattcttggtaaaaacacagaactctgggaa
tttgaagtttacaagtttaaagaaataggtcagcttaaggcgattagtcgttacttgccc
agacgggatccagttttgaaacctctgatctatgaaatggtcctgcatgagtttttggag
agtgactatgaggggtttgcaaccctgataaaagagtggcctggagatctctacaacaac
acaatcatagttcaagctgtagtggatcacctgaagaaagatccacagaacaggactttg
ctacaaacacttgcagaattgtatacttatgatcagcgctatggcagagccctagaaatt
tacctaactctgaggcataaggatgtcttccagttgatccacaagcacaatcttttcagt
tctatcagagacaaaattgttctgctcatggattttgattcagagaaagcagtagacatg
cttttggataacgaagataaaatttccattgacagagtcgttgaagaattagaaaacagg
cctgagctacagcatgtgtatttgcacaagcttttcaagagagaccaccataaaggccag
cgatatcatgagaaacagatcagcctctatgctgaatacgatcgtccaaatttactacca
tttctcagagacagcacgcactgtccactagagaaggctcttgagatctgccaacagagg
aactttgtagaagagacagtctatcttctgagcagaatgggtaatagccgcagtgccttg
aagatgataatggaagaactgcaagatgtagataaagctattgactttgccaaggaacaa
gatgatggagaactttgggaagacctcattttatattctatcgacaaaccaccttttatt
actggtttgttgaacaatattggaacccatgtggatcccattcttttgatccaccgcatt
aaggaaggcatggagattcctaatttgagagactcactagtgaaaattcttcaggactac
aacttgcagatcttgctgcgggaaggttgcaagaagatacttgttgccgattctctttct
ttattgaagaaaatgcatcgaactcagatgaagggtgttctagtagacgaggagaatatt
tgtgaatcatgcctgtctccaatacttccctcagatgcatccaagtccttcaacgtggta
gtgttccactgcagacatatgtttcacaaagagtgcctcccagtatccaacacagtatct
cctgtccagttctgcaacatatgcagtgccaaacaccgagggccaggaagcgcaatcctg
gagatgaagaaatag
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integrated database retrieval system
