KEGG   Nipponia nippon (crested ibis): 104010478
Entry
104010478         CDS       T05756                                 
Symbol
IFT140
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:nni03037]
    104010478 (IFT140)
Cilium and associated proteins [BR:nni03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   104010478 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 Beta-prop_HPS5 WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 TPR_GEMI5 TPR_COPA_B WD40_MABP1-WDR62_1st Clathrin Beta-prop_WDR35_TULP_N Consortin_N RLMM_N
Other DBs
NCBI-GeneID: 104010478
NCBI-ProteinID: XP_009460909
LinkDB
Position
Unknown
AA seq 1413 aa
MAVYVDHRTEAPDSVASPSHIAWHPLHPLLAVASISTAAGGCVDIYLEQGEHVSDAHVER
SFQVASLSWHPSRPILAAGWETGEVVMLNKQDKEQHAVPPNHSAKITVLNWSTNGTHLVS
GDAHGVLVLWRMDQRGRVQGPALLKHEYGKCLSHSVFRPPPPGEDFVQLAKAAVGGDEKA
LDMFNWRKAGMGAPPKMGLQEGLSFFITLTDGSMHYVNEKGKTRHVLSTDSLVQKLLFME
ERDVLVVITENLQLSLHAITLEGEAEELMKVKLSGKIGHSADIILIDHSLVVTALGETVI
RFWDLDRDENYVLSPDVQFGFEGGECINCVSYCSAKGLLAAGTNKGRIAMWRKAAGSDQS
IRALEGKEKWKLQAPTELEGNVTQIKWGSRKNLLAVNNLSSVLILSEQAMSSHFHQQVAV
VQVSPNLFNVTFFSTGTTHSLRVDMNVNGVFAAKDAVVFWNGKQVTVFECSGDTFRSAGS
FLCDSPVLSVHGENLYTVEPYRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTD
LAHFKIFDLSRREAKVHCNSKNFSELFPGLGGIASVKCNANGNKVSILVSKVDGNIDSKI
CFYDVEMDKITLFDFKAEQGNGREKLSSGQGIDKSVVEYPELHSHIPACHFWDQSEPRLF
VCEAVPETGLRFLDQKKNQTESTMDVWIISFFSTEEHGLLLQDSFPLPSAYQVLLGIEVP
HYYFAKKPGEAEKGQAESGSIKVSQMVARRPMRDFIGLGDCDKTTRDAMLNFSFYLTAGD
MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGNMGHARGAKALREAEQEPEQEA
RVAVLAIQLGMLEDAERLYKACKRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTYYNY
AKHLEATGEHGLALTHYEKSDTHRFEVPRMLSEDLQALENYVNKMKDKSLWKWWAQYLES
QSDMESALKYYGLAQDYFSLVRVHCFQGNIQKAAEIANETGNWAASYHLARQYESQDEIK
QAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAACYYEEKGEQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSDFFIEHAQYEKAMELLL
TAKKYHEALQLCLKQNLTITEEMAEKMTVSKDSTDLSEESRRELLEQIADCCMRQGNYHM
ATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQREIYIMAANYLQSLDWRKDPEIMK
NIISFYTKGRALDLLAGFYDACAQVEIDEYQNYEKAQGALTEAYKCLSKAKPRSPLEQES
KLAHLQSKMTLIKRFIHARRVYSEDPKEAVRQCELLLAEQDFDNAIRHGDVLGFLVXTLC
TSGGIPYGLPVSGRDAEENSTHEPDLLRDAADH
NT seq 4242 nt   +upstreamnt  +downstreamnt
atggctgtgtatgtggatcatcgaacagaagctcccgattcagttgcctctccttctcat
atagcatggcacccactccatccgctcctggcggttgcttccatcagcacagcagctggg
ggctgtgtggatatctacctggaacagggagaacatgtgtccgatgcacatgttgagaga
agttttcaggtcgcatcgctttcctggcacccttccagaccgattcttgcagcaggctgg
gagacaggagaagttgtgatgcttaacaaacaagacaaggagcagcacgctgtaccgcca
aatcatagcgccaaaattacagtcctaaactggagtacaaatggtacccaccttgtgtct
ggtgatgcgcatggtgtcttggttctatggagaatggaccagcgaggcagagtgcagggt
cctgccctgctgaaacacgagtatggaaaatgtctgtctcactctgtctttcgaccacct
cctcctggcgaggactttgtgcagctggcaaaagcagctgtgggtggtgatgagaaggcc
ttggatatgtttaactggagaaaagctggaatgggagcacctccgaaaatgggactccag
gaaggactgtccttctttatcactttgacagatggttctatgcattatgtgaatgagaaa
ggaaagacaaggcatgtattgtccacagacagtctggttcaaaagcttctcttcatggag
gaaagagatgttttagttgtaataacagagaacctgcagttgtccttgcatgccattact
cttgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagataggtcattct
gctgacatcattttaatagaccatagccttgttgttacagcactaggcgagacggtcatc
aggttctgggatttggaccgagacgaaaactatgtgctctccccagatgtgcaatttggc
tttgagggaggagaatgtattaactgtgtttcttactgcagtgctaaaggtctcttggca
gctggcacgaacaaagggagaatagctatgtggaggaaagcagcaggatccgatcagagc
atacgggctttggagggcaaggagaagtggaagctccaggcacctacagaacttgaagga
aatgtcactcagataaagtggggctcccgaaaaaacctgctggcggtgaacaacctcagc
tctgtgttgatcctcagtgagcaggccatgtcgtcgcattttcatcagcaagtggctgtt
gtacaggtgtctccgaacctgttcaatgtgaccttcttcagcacgggaaccacacacagt
cttcgtgtcgatatgaatgttaatggagtcttcgctgctaaggatgctgtagtattctgg
aatgggaagcaagttactgtttttgagtgctcgggagataccttcagaagtgcaggctct
tttctttgtgactctccagttctgtccgtgcatggagaaaacctgtacacagttgagcca
tatcgggtccaggtccgcacttggcagggcacagttaaacagctgctggtgttctctgaa
gcggagggaaatccatgcctcttggatgtctgtggaaatttcctggctgtgggaactgat
ttggctcacttcaaaatctttgatctctctcgcagagaggcaaaagtgcactgcaatagc
aagaatttctctgagctgtttcctggccttggaggcattgcatctgtcaagtgcaatgct
aatggcaacaaagtcagcatccttgttagcaaggtggatgggaatattgattccaagatc
tgtttctatgatgttgaaatggacaaaattactctctttgatttcaaggctgaacaggga
aatggtagagagaagctttcttctggacaaggcattgacaagtctgttgtggagtatcca
gagttgcacagtcacatccctgcttgccatttctgggaccagagcgaaccaagacttttt
gtatgtgaagcagttcctgaaacgggcctacgatttctagaccagaagaaaaaccagact
gagagcacaatggatgtttggattatatcattcttcagtactgaagagcatggccttctg
cttcaggacagctttccattgccttcagcctaccaggttcttctgggcatagaggtgcca
cattattactttgcaaaaaagccgggagaagctgagaaaggacaagcggagtctggctca
ataaaggtctctcagatggttgcgagaagacccatgagagatttcattggattaggagac
tgtgataagactactcgggatgccatgctgaacttcagcttctatctgactgctggagac
atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg
gctcgcatgtgtgtgaagactcagaggctcgatgttgccaaaatttgcctcggaaacatg
ggtcacgcaagaggagccaaggcgttgagggaggctgaacaagaaccagagcaggaggcc
agagtggcggtgctggccattcagctgggcatgctggaggatgcagagcgactgtacaag
gcttgcaaacgctatgacctcctgaacaagttctatcaagcctcaaaccagtggcagaaa
gccatcgaaacagcagaagctcacgatcgggttcacctgcgcaccacgtactacaactat
gctaagcacctggaggcgaccggagagcacggtcttgcactcacccactacgagaagtca
gacacgcataggtttgaggtaccccgaatgctctctgaagacttacaagccctggagaac
tatgtcaacaagatgaaagacaagagcctgtggaaatggtgggcacagtacctggagagc
caatcagatatggaatctgcactaaagtactatggactggctcaggactatttttcccta
gtccgtgtccactgctttcagggcaacattcagaaggctgctgaaatagcaaatgaaacg
gggaattgggcagcatcataccacttggcccgccagtatgagagtcaggatgaaatcaag
caggctgtacatttctacaccagggcccaggcatttaacaacgccatccgcttgtgtaag
gagaacaatttagatgatcagctgatgaacctggctctcttgagctctccggaagacatg
atagaggcagcctgctattatgaagaaaagggggagcaaatggacagagctgtcatgtta
taccacaaggcaggacatttctccaaagcactggagctagcctttgccacgcagcagttt
ggggccctacagctaattgctgaagacctggatgagaaatcagacccagctctgctagcc
cgctgttcggatttttttattgaacatgctcagtatgagaaggcaatggagctgctgcta
acagccaaaaagtaccatgaagctctgcaactttgcctgaagcagaacctgaccatcaca
gaggagatggctgagaagatgacggtctcgaaggactccacggacctctctgaggagtcc
cggagagagctgttggagcaaatcgccgattgctgcatgagacaaggcaattaccacatg
gcgaccaagaaatacacgcaagcaggaaacaagttaaaggctatgagggcactgttgaaa
tctggcgataccgagaaaattgtcttctttgcgggagtttccagacaaagagagatttat
atcatggcagccaactatctacaatcactggattggcgtaaggaccccgagattatgaag
aacatcattagcttctatactaagggaagggcccttgacctgttggcaggtttctacgat
gcatgtgctcaggtagaaattgatgagtatcagaactatgagaaagcacaaggagcgctg
acagaagcatataagtgcctttcaaaagcgaagcctagaagccctctggagcaggaaagc
aaactagcacatttgcaaagcaagatgaccctgattaagcgcttcatccacgctcggaga
gtttactctgaagaccccaaagaagcagtcagacagtgtgaactgctcctagctgagcaa
gattttgataatgccatccgtcacggcgatgtcttgggatttctggttngaacattatgt
acaagtggaggaattccatatggcttaccggtatctggaagagatgcagaagagaattcc
acccacgaacctgacctactacgtgacgcagcagaccattga

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