Nipponia nippon (crested ibis): 104010537
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Entry
104010537 CDS
T05756
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104010537 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104010537 (CLP1)
Enzymes [BR:
nni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104010537 (CLP1)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104010537 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
Motif
Other DBs
NCBI-GeneID:
104010537
NCBI-ProteinID:
XP_009460937
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
ISHHAGLHLRPRFLNESWHFYGARPRALSGNESLDLLRVNEWGPPAPPSVSPRRAGVVPL
RELRLGVVEEEGLFSGLTPPPSAPQITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGS
GYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECR
DDRIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTP
GRDMVHHLLSVSTADGPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKSFLLIM
DIRFMDLK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atctcccaccacgcagggctgcacctccggccccgcttcctcaacgagtcgtggcacttc
tacggcgcccgcccgcgggcgctgagcggcaacgagagcctggacctgctgcgcgtcaac
gagtggggaccgcccgctcccccgagcgtctcaccccgtcgagccggcgtggtcccgctg
cgggaactgcggcttggggtggtggaggaggagggtctcttctctggcctgacgcctccc
ccgtctgccccgcagatcacgtcccgcctggccgatgtcttcaaccagcgctgcgaggtg
aaccgccgcgcctccgtcagcggctgcgtcatcaacacctgcggctgggtgaagggctcg
ggctaccaggcgctggtgcacgccgcctccgccttcgaggtggacgtggtggtggtgctg
gaccaggagcggctctacaacgagctgaagagggacctgccccacttcgtgcgcaccgtc
ctgctccccaagtccggcggggtggtggagcgctccaaggacttccggcgggaatgccgc
gacgaccgcatccgggagtatttctacggcttccggggctgcttctaccctcacgccttc
gacgtcaagttctccgacgtcaagatctacaaggtgggggcgcccaccatcccggactcc
tgcctgcccctgggcatgtcgcaggaggacaaccagctgaagctggtgccggtgacgccg
gggcgggacatggtgcaccacctcctgagcgtcagcaccgccgacggccccgacgacaac
atctcggagaccagcgtggccggcttcatcgtcgtcaccggcgtcgacctggagcgccag
gtcttcaccgtgctctcccccgcgccgcggccgctgcccaagagcttcctcctcatcatg
gacatccgcttcatggacctgaagtag
DBGET
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