Nipponia nippon (crested ibis): 104010557
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Entry
104010557 CDS
T05756
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104010557 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
104010557 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104010557 (THOC5)
03041 Spliceosome [BR:
nni03041
]
104010557 (THOC5)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104010557 (THOC5)
Spliceosome [BR:
nni03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104010557 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104010557
NCBI-ProteinID:
XP_009460960
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGLQEGKRGKADADQDVRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNASEIDERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
NEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVL
HLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMELTVKLLR
TRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWAAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLNWKGERTSSNDDNIRA
MESEVNVNYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTSVEGPKEFPQEKMCLR
LVRGPMRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggactccagcaagaagaggaaacccaaagtgatccgcacggatgggggcctg
caggagggcaagcggggcaaggccgatgccgaccaggatgttaggtactacagcgaggag
tgcgaggtggatctccgtgaccccatcaaagactacgaactctacagagagacttgccag
gagctccagaggctgatggcagaaatccaggagctgaagagcagaggcatcaaggacaac
gcttcggagatcgatgagcggcggattcagagctgcgtccacttcatgaccctgaagaaa
ctcaaccggctggcgcatattcggctgaagaaagggcgagatcaaacccatgaggcaaag
cagaaggtcgacgcgtatcatctgcagctccagaacttgctctatgaggtgatgcacctg
cagaaagagatcaccaagtgcctggagttcaagtcaaaacacgaggaaatcgaactggtg
agcctggaggagttttacaaagaggccccccctgaaatcagccggcccgccatcaccctg
aacgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggagtgcctgaccagcaaggagaagatcctgaaggagatcgag
gtgaagaaggagtatctgagcagcctccagcctcggctcaacagcatcatgcaggcctcc
ctgcccgtccaggagtatctcttcatgccattcgaccaggcacacaaacagtacgagaca
gcccgacacctcccgccgcctctctacgtcctcttcgttcaagccagtgcctacgggcag
gcctgcgataagaagcttgtggtggccattgaagggagcgtagaggaagccaaagccctg
tacaagccgcctgaggactcacaggatgatgaaagcgattctgacgcagaggaggagcag
accacgaagcggcgcaggcccaccctgggcgtgcagctggacgacaagcgcaaggagatg
ctcaagcggcaccccttgtctgtcaccgtcgacctgaagtgcaaagatgagaacgtgctt
cacctgaccttctactacctgatgaacctcaacgtcatgacggtgaaagccaaggtgacc
actgccgttgagatgacaactgccatcagtgccggtgacctgctctccccagactccctc
ctcaactgcctctatccaggagaccatgggaggaaaacgcccaacccagccaaccagttc
cagtttgataaagtgggcatcctgaccttgagtgactacgtgacagagctggggcacccc
tacgtgtgggtgcagaagctgggcggcctgcatttccccaaggatcagcctcagcacacg
gtcactgcggacaactcgctgagcgccagccacatggagctgacggtgaagctgctgcgg
acgaggctgcagtcccgcctggctctccacaagcagtttgcgtcgctcgagcacggcgtt
gtgccagtctccagcgagtgccagcatctcttccctaccaagattgtctcgcgcctggtg
aagtgggctgccattccctacgaagattatgcggagctgccctacactaaagatgtgatc
gaggccggcttggctgaagacactcacctctactacatggctctgatagaaaggggaaca
gccaagctccaggccgccgtggtcctgaaccccggttactccacgctgccgcctgtcttc
agcctgtgcctgaactggaagggagagcgaaccagcagcaacgacgacaacattcgggcc
atggagagtgaggtcaacgtgaactacaaggagctgtgggggcccaaaccgggctaccag
ctcctcaccaaccagctgcagcgcctctgcatggtgctggacgtctacctggagacggag
ccccacgacaccagcgtggagggacccaaggagtttccccaggagaagatgtgtctgcgc
ctcgtcagggggcctatgcgcctgaagcccttcaagttcaactaccctcaggggttcttc
agccatcgctga
DBGET
integrated database retrieval system
